Gene Avin_35100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35100 
SymbolhtrB 
ID7762405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3584116 
End bp3585036 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content68% 
IMG OID643806376 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_002800634 
Protein GI226945561 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTC CGCACTTTCG TGCCCATTTT CTCCATCCGC GTTTCTGGGG GCTCTGGCTG 
GCGCTGGGGC TGTTCTGGCT GGTCGCTCAA TTGCCTTATG CCTGGCTGCT GCGGCTCGGC
CGCTGGCTGG GCGCGTTGAC CTATCGCCTG GCCGGTTCGC GCCGGCGCAT CGCCCGGCGC
AATCTGGAGC TGTGTTTTCC CGAGTTGTCC GCCGACGAGC GCGAACGCCT GCTCAGGGAG
AACTTCGCCT CGATGGGCAT CGCCTTCTTC GAGATGGCCA TCAGTTGGTG GTGGCCACGC
CGGCGCCTGG CCCGGCTGGC GCACGTCGAG GGGCTCGAAC ACCTGCAGCG GGCCCAGGCC
GAGGGCCGGG GCGTCATCCT CATGGCCCTG CATTTCACCA CCCTGGAGAT CGGCGCCGCC
CTGCTCGGCC AGCGGCAGAC CATCGACGGC ATGTACCGGG AACACGACAA CCCGGTCTTC
GATTACGTCC AGCGATGTGG TCGCGAACGG CACAACGCCG ATGCCACGGC CATCGAGCGC
GAGGATATCC GCGCCATGCT CAAGGTGCTG CGCGCCGGAC GCGCCATCTG GTACGCGCCG
GACCAGGACT ATGGGCGCAA GCAGAGCATC TTCGTGCCGT TGTTCGGCAT CCCGGCGGCG
ACCGTGACGG CGACGACCAA GTTCGCCCGC CTGGGCAAGG CGCTGGTGAT GCCCTTCATC
CAGACCCGCC TGGCCGATGG TTCCGGCTAC CGGCTGGCGG TCCACCCGCC GCTGGAGGAT
TTTCCCGGGG AGAGCGAGGA GGCCGACTGC CTGCGCATCA ACCGCTGGGT CGAGCAGGCG
GTGCGCCGGC AGCCCGAGCA ATACCTGTGG GCGCACCGGC GCTTCAAGAG CCGCCCGGAC
GGCGAACCGG GCCTCTACTG A
 
Protein sequence
MDRPHFRAHF LHPRFWGLWL ALGLFWLVAQ LPYAWLLRLG RWLGALTYRL AGSRRRIARR 
NLELCFPELS ADERERLLRE NFASMGIAFF EMAISWWWPR RRLARLAHVE GLEHLQRAQA
EGRGVILMAL HFTTLEIGAA LLGQRQTIDG MYREHDNPVF DYVQRCGRER HNADATAIER
EDIRAMLKVL RAGRAIWYAP DQDYGRKQSI FVPLFGIPAA TVTATTKFAR LGKALVMPFI
QTRLADGSGY RLAVHPPLED FPGESEEADC LRINRWVEQA VRRQPEQYLW AHRRFKSRPD
GEPGLY