| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35090 |
|---|
| Symbol | |
|---|
| ID | 7762404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3583329 |
|---|
| End bp | 3584102 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643806375 |
|---|
| Product | VacJ-like lipoprotein |
|---|
| Protein accession | YP_002800633 |
|---|
| Protein GI | 226945560 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.807776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGAAC GGCCCTGGCT CCTCGTCGCC GCGCTGCTTC TCGGCAGTCT GGCCCAGGCC
GCCGAACCGG CGGCCGATGC AGACGGTTTC AAGCGTCCGC TGGAGCGCCT GCAGTTCAAC
AGCGGCCACG AACAGCACGA ATTCGAGCGC GCCAGCCTCG CCATCCTCGA CGTCCGCGAT
CCCTGGGAGC GCTGGAACCG GCGGGTCTAT CACTTCAACT ACCGCCTCGA CGAATGGGTG
CTGCTGCCCG CGGTGCGCGG CTATCGCGCC GTCACCCCGG GCGTCGTGCG CAGCGGCGTG
CGCAATTTCT TCGCCAACCT CGCCGAAATC CCCGGCCTGC TCAACAGCCT GCTGCAACTG
CGCGGCCGAC GCGCCCTCGA TACCGGCGCC CGTCTGCTGC TCAACACCAC CCTGGGCGTC
GCCGGCCTGT GGGACCCGGC CAGCCGCATG GGCCTGCCCC GGCAGGGCGA GGACTTCGGC
CAGACCCTCG GCGTCTACGG CGTGCCCGCG GGCCCCTACC TGATGTTGCC GGTCCTCGGG
CCGTCCAACC TGCGCGACGC GGTCGGCCAA CTGACGGATT TCCTGGCCGC CAACCGAATC
GACTACCTGA ACGTCGCCAC GGCCAGCGAC GCCCACCCGG AAATCTCCGC GCTGAAGGCC
GTCGACAAGC GCGACAGCAT CCCCTTCCGC TACGGTCAGC TCAACTCGCC GTTCGAATAC
AACAAGATCC GCTACGTCTA CACCCGGGCC CGCCAGCTGC AGATCGAGGA ATAG
|
|---|
| Protein sequence | MVERPWLLVA ALLLGSLAQA AEPAADADGF KRPLERLQFN SGHEQHEFER ASLAILDVRD
PWERWNRRVY HFNYRLDEWV LLPAVRGYRA VTPGVVRSGV RNFFANLAEI PGLLNSLLQL
RGRRALDTGA RLLLNTTLGV AGLWDPASRM GLPRQGEDFG QTLGVYGVPA GPYLMLPVLG
PSNLRDAVGQ LTDFLAANRI DYLNVATASD AHPEISALKA VDKRDSIPFR YGQLNSPFEY
NKIRYVYTRA RQLQIEE
|
|---|
| |