Gene Avin_34840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34840 
Symbol 
ID7762379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3554136 
End bp3555923 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content69% 
IMG OID643806350 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002800608 
Protein GI226945535 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAG CCACCGATCG CCTGGGCTGG GCGGAGATCC GCCGGCTCGC CCTGCGCCAC 
CGCAAGGCCC TGATGCTGGC CAACCTGGTC GCCGTGCTAG CGGCCCTGAC CAGCGTGCCG
ATTCCGCTGC TGTTGCCGCT TTTGGTCGAC GAAGTGCTGC TCCGGCAAGG GGATGCGGCG
TTGCGCCTGA TGGATCGGGT GTTGCCCGCC GCCTGGCAGA GTGCGGTCGG CTACATCGGC
CTGATGCTGC TGGCGACCCT GCTGCTGCGC AGTGCCTCGC TGCTGTTCGG CGTGCTGCAG
GCCCGGTTGT TCGCCCGGCT GTCGAAGGAT GTCGTCTATC GCCTGCGCAT GCGCCTGATC
GAGCGACTCA AGCGCATCTC CCTGGGCGAA TACGAAAGCC TCGGCAGCGG CACCGTGACC
GCCCACCTGG TCACCGACCT GGACACCCTG GACTCCTTCG TCGGCGACAC CCTGAGCCGT
TTCCTGGTCG CCGTCCTGAC CCTGGCCGGT ACTTCGGCGA TCCTGATCTG GATGCACTGG
CAACTGGCCC TGCTGATCCT CCTGTTCAAC CCCTTGGTGA TCTACGCCAC CGTGCTGCTC
GGCAAGCGTG TCAAGCACCT GAAGAAGCTG GAAAACGACA GCACCGCGCG CTTCACCCAG
GCGCTCGGCG AAACCCTGGA GGCGATCCAG GAGGTGCGCG CCGGCAACCG CCAGGGCTTC
TTCCTCGGCC GCCTCGGCCT GCGCGCCCGG GAAGTGCGCG ACCGCGCCGT CGCCTCGCAG
TGGAAGACCG ATGCCTCGAC CCGCGCCAGC GGCCTGCTGT TCCAGTTCGG CATCGACGTG
TTCCGCGCCG CGGCGATGCT CACCGTGTTG TTCTCCGACC TGTCGATCGG CCAGATGCTC
GCGGTGTTCA GCTACCTGTG GTTCATGATC GCCCCGGTGG AGCAACTGCT CGGCCTGCAA
TACGCCTTCT ACGCCGCCGG CGGCGCCCTG GCGCGGATCA ACGAGCTGCT CGCCCGCGCC
GACGAGCCGC AGTACTCCGG CAGCGTCGAT CCGTTCAAGG GACGCGCCAC GGTCGGCATC
GAGGTGCGCG ATCTGCATTT CGCCTACCGC GACGAACCGG TGCTGGACGG TCTCGACCTG
TCCATCGCGC CGGGCGAGAA GGTCGCCGTG GTCGGCGCCT CGGGCGGCGG CAAGAGCACC
CTGGTGCAAC TGCTGCTCGG CCTCTACAGC CCGCAGTCGG GGAGCATCCG GTTCGGTGGT
TCGACCCTGG AGGAGATCGG CCTGGAGCGG GTGCGCGAGC ACGTCGCGGT GGTCCTCCAG
CAGCCGGCGC TGTTCAACGA CACGGTGCGC GCCAACCTGA CCCTGGGCCG CGAGCGCAGC
GACGAGGACT GCTGGCAGGC GCTGGAGATC GCCCAACTGG CGGCGACCGT GCGCGCCCTG
CCGCAGGGGC TGGACAGCGT GGTCGGCCGC TCCGGCGTAC GCCTCTCCGG CGGCCAGCGG
CAACGCCTGG CGATCGCCCG CATGGTGCTC GCCGACCCGC AGGTGGTGAT CCTCGACGAA
GCCACCTCGG CCCTCGATGC GGCCACCGAA TACGCCCTGC ACCAGGCGCT GGCGCGCTTC
CTCCACGGCC GCACCACGCT GATCATCGCC CACCGCCTGT CGGCGGTGAA GCAGGCCGAC
CGGGTGCTGG TGTTCGACGA CGGGCGCATC GCCGAGGAGG GCGACCACCA CCAACTGATC
GCCGGGGGCG GCCTGTACGC CAAGCTCTAC GGGCATTTGC AGCACTGA
 
Protein sequence
MPEATDRLGW AEIRRLALRH RKALMLANLV AVLAALTSVP IPLLLPLLVD EVLLRQGDAA 
LRLMDRVLPA AWQSAVGYIG LMLLATLLLR SASLLFGVLQ ARLFARLSKD VVYRLRMRLI
ERLKRISLGE YESLGSGTVT AHLVTDLDTL DSFVGDTLSR FLVAVLTLAG TSAILIWMHW
QLALLILLFN PLVIYATVLL GKRVKHLKKL ENDSTARFTQ ALGETLEAIQ EVRAGNRQGF
FLGRLGLRAR EVRDRAVASQ WKTDASTRAS GLLFQFGIDV FRAAAMLTVL FSDLSIGQML
AVFSYLWFMI APVEQLLGLQ YAFYAAGGAL ARINELLARA DEPQYSGSVD PFKGRATVGI
EVRDLHFAYR DEPVLDGLDL SIAPGEKVAV VGASGGGKST LVQLLLGLYS PQSGSIRFGG
STLEEIGLER VREHVAVVLQ QPALFNDTVR ANLTLGRERS DEDCWQALEI AQLAATVRAL
PQGLDSVVGR SGVRLSGGQR QRLAIARMVL ADPQVVILDE ATSALDAATE YALHQALARF
LHGRTTLIIA HRLSAVKQAD RVLVFDDGRI AEEGDHHQLI AGGGLYAKLY GHLQH