Gene Avin_34670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34670 
Symbol 
ID7762362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3539727 
End bp3541016 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content69% 
IMG OID643806333 
ProductTransmembrane transport protein 
Protein accessionYP_002800591 
Protein GI226945518 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGACCA ACATTGCCCC CATCGGTTCG CTGCTCGGCG GGGTCGCACT GCTCCTGCTC 
GGCAACGGAC TGCTCAACAC CCTGCTGACC CTGCGTGGCG TCGCCGAAGG CTACTCCACC
GGGCTGCTCG GCCTGCTGAT GTCCGGCTAT TTCGTCGGCT ACCTGCTCGG CACCTGGCTG
ACGGTACCGC TGATCCGCCG CATCGGGCAT ATCCGCGCCT TCGCCTGTTG CGCCGCCTCG
GGCGCCATCG TCGCGCTGCT CCACCTGATT CTGGTCAACC CCTGGGTGTG GATGGTGCTG
CGCGTGGTCT ACGGCATCGT CCTGGTCACC CTCTACATGG TCATCGAGAG CTGGCTCAAC
GCCCGGGTCA GCGGCGACAG CCGCGGCCGG GTGTTCGCCG TCTACATGGC GGTCAACCTC
GGTGCCCTGG CCCTCGCCCA GCAGCTCTTG AACCTCGCCA GTCCGCTGGA ATTCCTGCTC
TTCGCCATCG CCGGCATCCT CATCTGCGCC GCGCTCTTGC CCATCACCCT CACCCGCCAG
GCACAGCCGA CCCTGCCCGA CACGCCGCCC ACCGAGCTGC GCCAACTGGC GCGAATCGCG
CCGCTGTCGG TGACCGCCGC CGGGCTGTCC GGTCTCGCCC TCGGCGCCTT CTGGGGCCTT
GCGCCGGTAT ACGCCAGCCA CAGCGGCTTC GACGCCGCCG GCGTGGGATT GCTGATGGGG
GCGACCATTC TCGGTGGCGC CGTGCTGCAG TGGCCCATCG GCCGCTACTC GGACAGCCAC
GACCGCGCGA AGGTGATGCT CTGCGTGGTG ACCCTGGCCG CGCTGACGGC ACTGGCCATC
AGCCTGCTGC CCACCGGCGG CTTGCTGCTC GGCGCCTTCT TCCTCTGGGG CGGGCTGGCC
TTCTCCATCT ATTCCATCGC CATGGCGCGG ATGGTCGATC AGTTGCACCC GGACGAGATC
CTCTCCGGCT GCAGCGGCCT GCTGCTGGTC AATGGCCTGG GCTCGGCCTG CGGCCCGCTG
CTCGCCGGCC TGGCCATGCA CCTGCTCGGT CCGCGCGGAC TGCCGCTCTA CTGCGCGGCG
GTGCTCGGCC TGCTGGCGCT CTACACCCTC CATCGCCTGC ACCGGGTGAG CGATCTGCTC
AGCGAGCCGC ACGCCCAGTT CACCCCCATG CTGCGCACCA GCCATACCGT GCTCGAACTG
ATGCCCGAGG CCCCGGAAAG CGCGGCCGAC TCCAGCCCCG ACGCCGCCGT GGCGGAGCCG
GGCACCACCA GGGAGGAAAC CTGTATCTGA
 
Protein sequence
MWTNIAPIGS LLGGVALLLL GNGLLNTLLT LRGVAEGYST GLLGLLMSGY FVGYLLGTWL 
TVPLIRRIGH IRAFACCAAS GAIVALLHLI LVNPWVWMVL RVVYGIVLVT LYMVIESWLN
ARVSGDSRGR VFAVYMAVNL GALALAQQLL NLASPLEFLL FAIAGILICA ALLPITLTRQ
AQPTLPDTPP TELRQLARIA PLSVTAAGLS GLALGAFWGL APVYASHSGF DAAGVGLLMG
ATILGGAVLQ WPIGRYSDSH DRAKVMLCVV TLAALTALAI SLLPTGGLLL GAFFLWGGLA
FSIYSIAMAR MVDQLHPDEI LSGCSGLLLV NGLGSACGPL LAGLAMHLLG PRGLPLYCAA
VLGLLALYTL HRLHRVSDLL SEPHAQFTPM LRTSHTVLEL MPEAPESAAD SSPDAAVAEP
GTTREETCI