| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_34440 |
|---|
| Symbol | csrA |
|---|
| ID | 7764149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3517851 |
|---|
| End bp | 3518000 |
|---|
| Gene Length | 150 bp |
|---|
| Protein Length | 49 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643806310 |
|---|
| Product | carbon storage regulator, CsrA |
|---|
| Protein accession | YP_002800568 |
|---|
| Protein GI | 226945495 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.214344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGTG ATGATGTGAC AGTCACCGTG CTGGGCGTGA AAGGTAATCA GGTTCGCATC
GGCGTCAATG CACCAAAAGA GGTCGCCGTG CACCGCGAAG AAATCTACCA GCGCATTCAG
AAAGAAAAAG ATCAAGAGCC AAGCCACTAA
|
|---|
| Protein sequence | MVGDDVTVTV LGVKGNQVRI GVNAPKEVAV HREEIYQRIQ KEKDQEPSH
|
|---|
| |