Gene Avin_34290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34290 
Symbol 
ID7762324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3503414 
End bp3504298 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID643806291 
ProductTranscriptional regualtor, LysR family 
Protein accessionYP_002800553 
Protein GI226945480 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG CCAGCCTCAA TGCCTTCATC GCGGTCGCCG AAACCGGCAG CTTCTCCGAA 
GCCGGCGAAC GCCTGCACCT GACCCAGCCA GCGGTGAGCA AGCGTATCGC CGCACTGGAG
CAGCAGCTTC AGGTGCGCCT GTTCGACCGC CTCGGCCGCG AGGTGAGGCT GACCGAGGCC
GGCCGGGCGC TGCTGCCGCG AGCTTACCGG ATACTCAGCG TGCTGGAGGA CACCCGGCGG
GCACTGAACA ACCTCAACGG CGATGTCAGC GGTCGGCTGA CTCTGGCGAC CAGCCACCAC
ATCGGCCTGC ACCGACTGCC GCCACTGCTG CGCGCCTTCA CCCGCGCCTA TCCGCAGGTG
GCGCTGGACA TCCGCTTCCT CGATTCGGAA GTGGCCTACG AGGAGATCCT GCACGGCCGC
GCCGAGCTGG CGGTGATCAC CCTGGCACCG GAGACGGCGC CGCCGGTGCG GGCGGTGAAG
GTCTGGGACG ATCCGCTGGA TTTCGTCGCC GCTCCCGAGC ACCCGCTGGC GCGCAACGCC
CAAGTGAGCC TGGCCGACGT GGCCCGGCAT CCGGCGGTGT TCCCCGGCGG CAATACCTTC
ACCCATCACA TCGTCCGGCG CCTGTTCGAA CGCGAGGGAT TGGCGCCCGG CATCGCCATG
AGCACCAACT ATCTGGAGAC GATCAAGATG ATGGTGTCCA TCGGCATCGC CTGGAGCGTG
CTGCCACGCA CCATGCTGGA CGATCAGGTG AAATCCCTGA CGCTGCCCGG CATCCACCTG
TCGCGCCAGC TCGGCTACAT CCTGCACACC GAGCGGACCC TGTCCAACGC GGCGCGGGCC
TTCATGGCGC TGCTCGACGG TGCGCGCGAG GCGCCTGCCT CCTGA
 
Protein sequence
MDLASLNAFI AVAETGSFSE AGERLHLTQP AVSKRIAALE QQLQVRLFDR LGREVRLTEA 
GRALLPRAYR ILSVLEDTRR ALNNLNGDVS GRLTLATSHH IGLHRLPPLL RAFTRAYPQV
ALDIRFLDSE VAYEEILHGR AELAVITLAP ETAPPVRAVK VWDDPLDFVA APEHPLARNA
QVSLADVARH PAVFPGGNTF THHIVRRLFE REGLAPGIAM STNYLETIKM MVSIGIAWSV
LPRTMLDDQV KSLTLPGIHL SRQLGYILHT ERTLSNAARA FMALLDGARE APAS