Gene Avin_34270 details

Gene Information

• Locus tag: Avin_34270
• Symbol: leuD
• ID: 7762322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 3501158
• End bp: 3501805
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643806289
• Product: 3-isopropylmalate dehydratase small subunit , LeuD
• Protein accession: YP_002800551
• Protein GI: 226945478
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCCT TTACCCAGCA CACCGGTCTG GTCGCTCCCC TTGATCGCGC CAATGTCGAT 
ACCGATCAGA TCATTCCCAA GCAGTTCCTC AAATCGATCA AGCGCACCGG CTTCGGTCCC 
AATCTGTTCG ACGAGTGGCG TTATCTGGAC GTCGGCCAGC CGGGCCAGGA CTGCTCGGCG 
CGTCCGCTGA ACACCGGGTT CGTGCTGAAC CTGCCGCGCT ACCAGGGCGC CAGCGTACTG 
CTGGCCCGCG AGAACTTCGG CTGCGGCTCG AGCCGCGAGC ACGCACCTTG GGCGCTGGAT 
GAGTACGGTT TCCGCACGGT CATCGCGCCG AGCTTCGCCG ACATCTTCTT CAACAACAGC 
TTCAAGAACG GCCTCCTGCC GATCATCCTG CCGGAAGCCG AGGTGGACGA ACTGTTCAGG 
CAGTGCGAAT CGACCGAGGG CTACCGACTG ACCGTCGACC TGGCCGCGCA GACCGTGACC 
CGCCCGGACG GCAAGGCGCT GTCCTTCGAG ATCGATCCGT TCCGCAAGCA TTGCCTGCTC 
AACGGCCTGG ACGACATCGG CCTGACCCTG CGGGATGCCG ACGCCATCCG CGTGTTCGAG 
GAAAAGCACC GGCAGGCCAG CCCCTGGCTG TTCGGCGCGA TCAAGTAA 

 

Protein sequence

MKAFTQHTGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD VGQPGQDCSA 
RPLNTGFVLN LPRYQGASVL LARENFGCGS SREHAPWALD EYGFRTVIAP SFADIFFNNS 
FKNGLLPIIL PEAEVDELFR QCESTEGYRL TVDLAAQTVT RPDGKALSFE IDPFRKHCLL 
NGLDDIGLTL RDADAIRVFE EKHRQASPWL FGAIK