| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_34140 |
|---|
| Symbol | metZ |
|---|
| ID | 7762309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3486396 |
|---|
| End bp | 3487607 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643806276 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_002800538 |
|---|
| Protein GI | 226945465 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG AGTGGGATGC CGGGCGGCTG GACAGCGACC TGGAGGGTGC CGGCTTCGAC
ACCCTGGCGG TGCGGGCCGG TCAGCGGCGC ACTCCCGAGG GCGAGCACGG CGAGGCCCTA
TTCATGACCT CCAGCTACGT GTTCCGCAGC GCTGCCGATG CCGCCGCCCG CTTTGCCGGC
GAGCAGCCCG GCAACGTCTA CTCCCGCTAC ACCAATCCCA CGGTGCGTAC CTTCGAGGAG
CGCATCGCCG CCCTCGAAGG GGCCGAGCAG GCGGTTGCCG CGGCCTCCGG CATGGGCGCC
ATCCTGGCGA TGGTGATGAG CCTGTGCAGC GCCGGCGACC ATGTGCTGGT GTCGCGCAGC
GTATTCGGTT CGACCATCAG CCTGTTCGAC AAGTATTTCA AGCGTTTCGG CATCGAGGTC
GACTATCCGC CCCTGGCGGA TCTGGAAGCC TGGGCCGCCG CCTGCAAGCC GAACACCCGG
CTGTTCGTCG TCGAGTCTCC ATCCAACCCC CTGGCCGAGT TGGTGGACAT CGCCGCGCTG
GCCGACATCG CCCATGCCCG TGGCGCCCTG CTGGCGGTGG ACAACTGCTT CTGCACGCCG
GCGTTGCAGA AGCCGTTGGC GCTCGGCGCC GATATCGTCA TCCATTCGGC GACCAAGTAC
ATCGACGGCC AGGGGCGTTG CCTCGGCGGC GTGGTGGCCG GCAGCGCCAA GCTGATGCAG
GAGGTGGTCG GCTTCCTGCG TACCGCCGGC CCGACGCTCA GCCCCTTCAA TGCCTGGCTG
TTCCTCAAGG GGCTGGAAAC CCTCCGGGTG CGCATGCAGG CGCACTGTGC CAGCGCCCAG
GCGCTGGCCG AGTGGCTGGA GCAGCAGCCC CAGGTGGTCA GGGTCCATTA CGCCGGTCTG
TCCAGCCATC CGCAGCACGA GTTGGCCAGG CGCCAGCAGA GCGGCTTCGG CGCGGTGGTC
AGTTTCGAGG TCCGGGGCGA CAAGGCGGCC GCCTGGCGGG TCATCGACAA TACCCGGATG
ATCTCCATCA CCACCAACCT GGGCGATACC AAAACCACCA TCGCCCATCC GGCCACCACT
TCCCACGGAC GCCTGACCCC GGAGGCGCGG GCGGCGGCCG GGATCAGTGA CAGCCTGATC
CGTGTGGCGG TCGGCCTGGA GGACATCGAA GACATCAAGG CCGATCTTGC CCGAGGGTTG
TCCGCACTGT GA
|
|---|
| Protein sequence | MTIEWDAGRL DSDLEGAGFD TLAVRAGQRR TPEGEHGEAL FMTSSYVFRS AADAAARFAG
EQPGNVYSRY TNPTVRTFEE RIAALEGAEQ AVAAASGMGA ILAMVMSLCS AGDHVLVSRS
VFGSTISLFD KYFKRFGIEV DYPPLADLEA WAAACKPNTR LFVVESPSNP LAELVDIAAL
ADIAHARGAL LAVDNCFCTP ALQKPLALGA DIVIHSATKY IDGQGRCLGG VVAGSAKLMQ
EVVGFLRTAG PTLSPFNAWL FLKGLETLRV RMQAHCASAQ ALAEWLEQQP QVVRVHYAGL
SSHPQHELAR RQQSGFGAVV SFEVRGDKAA AWRVIDNTRM ISITTNLGDT KTTIAHPATT
SHGRLTPEAR AAAGISDSLI RVAVGLEDIE DIKADLARGL SAL
|
|---|
| |