| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_33710 |
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| Symbol | algE5 |
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| ID | 7762266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3445248 |
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| End bp | 3448244 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643806232 |
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| Product | Secreted mannuronan C5-epimerase |
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| Protein accession | YP_002800496 |
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| Protein GI | 226945423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTACA ACGTCAAAGA TTTCGGGGCG CTGGGCGATG GCGTCAGCGA CGATACGGCC
GCCATCCAGG CGGCGATCGA TGCCGCCTAC GCGGCCGGCG GCGGCACCGT CTACCTGCCG
GCCGGCGAAT ACCGGGTCAG CGGTGGCGAG GAGCCTTCCG ACGGTTGCCT GACCATCAAG
AGCAACGTCT ACATCGTCGG CGCGGGGATG GGCGAGACGG TGATCAAGCT GGTCGACGGC
TGGGATCAGG ACGTCACCGG CATCGTCCGC TCGGCCTATG GCGAGGAGAC CAGCAACTTC
GGCATGAGCG ACCTGACCCT CGACGGCAAC CGCGACAACA CCAGCGGCAA GGTCGACGGC
TGGTTCAACG GCTACATTCC CGGCGAGGAC GGCGCCGACC GCGACGTGAC CCTGGAGCGG
GTGGAAATCC GTGAAATGTC CGGTTACGGT TTCGATCCGC ACGAGCAGAC CATCAACCTG
ACGATCCGCG ACAGCGTGGC CCACGACAAC GGCCTCGACG GCTTCGTCGC CGATTTCCAG
ATCGGCGGGG TGTTCGAGAA CAACGTCTCG TACAACAACG ACCGCCACGG CTTCAACATC
GTCACCAGCA CCAACGACTT CGTCCTGAGC AACAACGTCG CCTACGGCAA CGGCGGCGCC
GGCCTGGTGA TCCAGCGCGG CTCCTACGAC GTGGCTCACC CCTACGGCAT CCTGATCGAC
GGCGGCGCCT ACTACGACAA CGGCCTGGAA GGCGTGCAGA TCAAGATGGC CCACGACGTC
ACCCTGCAGA ACGCCGAGAT CTACGGCAAC GGCCTCTATG GGGTGCGCGT CTACGGCGCC
GAGGACGTGC AGATCCTCGA CAACTACATC CACGACAATT CGCAGAGCGG TTCCTACGCG
GAAATCCTCC TGCAGTCCTA CGACGATACC GCCGGGGTGT CCGGCAATTT CTACACCACC
ACCGGCACCT GGATCGAAGG CAACACCATC GTCGGCTCGG CCAACTCCAC CTACGGCATC
CAGGAGCGCG CCGACGGCAC CGACTACAGC AGCCTCTACG CCAACAGCGT CAGCAATGTG
CAGAGTGGCT CGGTGCGCCT CTACGGCACC AACTCCGTCG TCTCCGACCT GCCCGGCACC
GGCCAGCAGG CGACCCTCGA AGGCACGACC GGCAACGACA CGCTGACCGG CAGCGACGCC
CACGAGACGC TGCTCGGCCT GGACGGCGAT GACCGCCTGA ACGGCGGCGC CGGCAACGAC
ATCCTCGACG GCGGGGCGGG GCGCGACAAC CTGACCGGCG GCGCGGGCGC CGACCTGTTC
CGCGTCTCCG CGCGCACCGA CAGCTACCGC ACCGACAGCG CCAGCTTCAA CGACCTGATC
ACCGACTTCG ACGCCGACGA GGACAGCATC GACCTGTCGG CGTTGGGCTT CACCGGGCTG
GGCGACGGCT ACAACGGCAC CCTCGCCGTG GTGCTCAACA GCGCCGGGAC CCGCACCTAC
CTGAAGAGCT ATGAGGCGGA TGCCGAGGGC CGGCGTTTCG AGATCGCCCT GGACGGCAAC
TTCGCCGGCC TGCTCGACGA CGGCAACCTG ATCTTCGAGC GTCCCGTCAT CGAAGGGGAC
GCCGGCAACA ACGCCCTGCT CGGCACCTCG GCCGCCGAGA CGCTGCTCGG CCATGCCGGC
AACGATACGC TGGACGGCGC CGGCGGCGAC GACATCCTGG TCGGCGGTGC CGGGCGCGAC
ACCCTCACCG GTGGGGCCGG GGCCGACCTG TTCCGCTTCG ACGCGCTGTC CGACAGCCAG
CGCAACTACA CCACCGGCGA CAACCAGGGC GACCGCATCG TCGACTTCAG CGTGGGCGAA
GACAAGCTCG ACGTGTCGGC GCTGGGCTTC ACCGGGCTGG GCGACGGCTA CAACGGCACC
CTCGCCGTGG TGGTCAACAG CGCCGGCGAC CGCACCTACG TGAAAAGCTA CGAGAACGGC
GCCGACGGCT ACCGCTTCGA GTTTTCCCTC GACGGCAACT ATCTGGAGCT GCTCGGCAAC
GAGGATTTCA TCTTCGCCAC GCCCAGCGGC CAGCAACTCC TCGAAGGCAG CGCCGGCAAC
GACAGCCTGC AGGGCACGGC CGCCGACGAA ATCGTCCACG GTGGGGCAGG GCGCGACACC
CTGAGCGGCG GGGCCGGGGC CGACGTGTTC CGCTTCAGCG AACTGACCGA CAGCTACCGC
ACCGCGAGTA CCAGCTTCGC CGATCTGATT ACCGACTTCG ATCTGGCCGA CGACCGCATC
GACCTGTCCG GGCTCGGTTT CAGCGGCCTG GGCGACGGCT ACGACGGCAC CTTGGCCGTG
GTGGTCAACA GCACCGGCAC CCGCACCTAC CTGAAGAGCT ACGAGGCCAA CGCCGCCGGC
GAACGCTTCG AGATCGCCCT GGACGGCGAC CTGTCCGCGT TCACCGGGGC CAACCTGATC
CTCGACGAGC GCGTCGTGCT GGAAGGCAGC GACGGCAACG ACACGCTCGA CGGCGGCAGT
GCGGCCGAGG AATTGCTCGG CGGGGCCGGC AACGACAGCC TGGACGGCGG CGCCGGCAAC
GATATCCTCG ACGGCGGCGC CGGGCGCGAC ACTCTCACCG GCGGCAGCGG CGCCGACGTG
TTCCGCTACG ACGACGCACT CGACAGCTTC CGCAACTACG GCACCGGCGT GACCGGCACC
GACACCATCA CCGACTTCAC CCCCGGCGAG GATCTGATCG ACCTGTCCGC GCTCGGCTAC
ACCGGGCTGG GCGACGGTTA CAACGGCACC CTTGCCGTGG TGCTCAACGG CGACGGCACC
AGAACCTACC TGAAGGACCG CGAGAGCGAC GCCGAAGGCA ACCAGTTCGA GATCGCCCTG
GGCGGCGATC TCGTCGACCG GCTTGATGCG GGCGACTTCA TCTTTGCCGA GGCAGCCGCG
ACCACCGCGA TCGAGGTGGT CGGCGGTACG CCGACCGAGG AGCAGTTGGT TGCTTGA
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| Protein sequence | MDYNVKDFGA LGDGVSDDTA AIQAAIDAAY AAGGGTVYLP AGEYRVSGGE EPSDGCLTIK
SNVYIVGAGM GETVIKLVDG WDQDVTGIVR SAYGEETSNF GMSDLTLDGN RDNTSGKVDG
WFNGYIPGED GADRDVTLER VEIREMSGYG FDPHEQTINL TIRDSVAHDN GLDGFVADFQ
IGGVFENNVS YNNDRHGFNI VTSTNDFVLS NNVAYGNGGA GLVIQRGSYD VAHPYGILID
GGAYYDNGLE GVQIKMAHDV TLQNAEIYGN GLYGVRVYGA EDVQILDNYI HDNSQSGSYA
EILLQSYDDT AGVSGNFYTT TGTWIEGNTI VGSANSTYGI QERADGTDYS SLYANSVSNV
QSGSVRLYGT NSVVSDLPGT GQQATLEGTT GNDTLTGSDA HETLLGLDGD DRLNGGAGND
ILDGGAGRDN LTGGAGADLF RVSARTDSYR TDSASFNDLI TDFDADEDSI DLSALGFTGL
GDGYNGTLAV VLNSAGTRTY LKSYEADAEG RRFEIALDGN FAGLLDDGNL IFERPVIEGD
AGNNALLGTS AAETLLGHAG NDTLDGAGGD DILVGGAGRD TLTGGAGADL FRFDALSDSQ
RNYTTGDNQG DRIVDFSVGE DKLDVSALGF TGLGDGYNGT LAVVVNSAGD RTYVKSYENG
ADGYRFEFSL DGNYLELLGN EDFIFATPSG QQLLEGSAGN DSLQGTAADE IVHGGAGRDT
LSGGAGADVF RFSELTDSYR TASTSFADLI TDFDLADDRI DLSGLGFSGL GDGYDGTLAV
VVNSTGTRTY LKSYEANAAG ERFEIALDGD LSAFTGANLI LDERVVLEGS DGNDTLDGGS
AAEELLGGAG NDSLDGGAGN DILDGGAGRD TLTGGSGADV FRYDDALDSF RNYGTGVTGT
DTITDFTPGE DLIDLSALGY TGLGDGYNGT LAVVLNGDGT RTYLKDRESD AEGNQFEIAL
GGDLVDRLDA GDFIFAEAAA TTAIEVVGGT PTEEQLVA
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