Gene Avin_33690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_33690 
Symbol 
ID7762264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3441972 
End bp3443414 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content57% 
IMG OID643806230 
Productsugar transporter 
Protein accessionYP_002800494 
Protein GI226945421 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGCA AAGAAAGGTA CAAAGCCGCC TACGTCTACT GGCTCTGCTG TATCGCCACC 
CTGGGCGGAG TGATGTTCGG CTTTTCGACC GGCGTCATTT CCGGCTCGGT CGAATTGATA
CAGCAATACT TCCATCTGAG CCCGGCCGAA ACAGGCTGGA TCGTTTCCAG CATTTTCGTC
GGTTGTGTCC TGGGGGCGCT GGCCGCCGGG AAACTGGCCG ACCGGATAGG CCGCAAGTCC
ACGCTGCTGC TCTCGACGCT GGCCTTTGCG ATTTCGGCAT ACGGCACGAC GTTCGCGGAC
TCCTTTGCCA TCTTCTCGTC GGCAAGGATC GTCGCCGGTA TAGGCATCGG TCTGGCGAGC
ACGGTCGTCC CCCTGTACAT GGGGGAAATA GCGCCAAGGG ATATTCGTGG CAAGGCGTCC
GGCATCTGGG ACCTGTCGCT ACTGGGTTCG CAAACCCTGG TTTTCCTGGT GAACTTCCTG
ATCGGCAAGG GGATGACGGA AGCCTGGCTG GTCGAGGTCG GCTGGCGCTG GATGATGGGT
GCGCAATTCG TTCCGGTGGC GTTGATGCTG GTTTGCACGC TGATACTCCC GGAATCGCCG
ACCTGGTGCA TCGATACACG GCGCGTCGAG AGAGCGATCA AGGTTCTGTC GAAGATATAT
CCGGACCTGA ACCATGAAGA AGCCCGGCAG TTCTTTTCCG CACGCGAGAC TGCCGGCGGC
AGTCTGGGCT TGGGGGTCAT CCTGCGCACG CCGGTATTGC GTTATGGCCT CATCGTCGGC
TGCGCCATCG GGGTACTCCA GCAATTCACC GGCGCGGCGA TCGTCATGTA TTACGCTCCG
GTTATTCTGC AGACCGGCGA CATGTCCAAG GACGCGCTGC TTTTTCAAAC CATTTTCATC
GGTCTGTTCA CGGGTATCGC CTCCTTCGTC GGCATGACGC TGTTCGACCG TTTCGGACGC
CGTCCGGTGA TGAAGTTCGG CACCATTGGC TCGATCGTGG GGCTGTTGCT GATTTCATAC
AGCATGTACA CCCATCATTC CGGTTACCTG TCCATTTTCG CCGCACTGTT TTTCATGGCG
ATGTTCGGTA TCAGTTGGAG TGCTGGTTGC TGGGTACTGC TTTCGGAAAT ATTTCCGCCG
CGGATAAGAA GTCATGCCAC CGGACTGGCC GTCACGCTCA TGTGGGCCTT CAACTTCCTG
GTGACCCAGT TCTTCCCGAT GATCAACGAA ATCCCCGTAT TGCAGGAGTC GTTCAACGGG
GCCTTCACCA TGTGGATATT CGTGGCGTTC AATCTGTTCT GCCTGTTTTT CCTGATTCGC
TATCTGCCGG AAACCAGGGG CGTCGCCCTG GACGACATGG AAGCGTTGAT CGAAAGCCAT
CGCCGCAAGT TATCCAGAAA AACCGGCGAA ACTCGTACGA GTATCGCTGT TTCCGATATA
TGA
 
Protein sequence
MLSKERYKAA YVYWLCCIAT LGGVMFGFST GVISGSVELI QQYFHLSPAE TGWIVSSIFV 
GCVLGALAAG KLADRIGRKS TLLLSTLAFA ISAYGTTFAD SFAIFSSARI VAGIGIGLAS
TVVPLYMGEI APRDIRGKAS GIWDLSLLGS QTLVFLVNFL IGKGMTEAWL VEVGWRWMMG
AQFVPVALML VCTLILPESP TWCIDTRRVE RAIKVLSKIY PDLNHEEARQ FFSARETAGG
SLGLGVILRT PVLRYGLIVG CAIGVLQQFT GAAIVMYYAP VILQTGDMSK DALLFQTIFI
GLFTGIASFV GMTLFDRFGR RPVMKFGTIG SIVGLLLISY SMYTHHSGYL SIFAALFFMA
MFGISWSAGC WVLLSEIFPP RIRSHATGLA VTLMWAFNFL VTQFFPMINE IPVLQESFNG
AFTMWIFVAF NLFCLFFLIR YLPETRGVAL DDMEALIESH RRKLSRKTGE TRTSIAVSDI