| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_33440 |
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| Symbol | vnfA2 |
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| ID | 7762240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 3419317 |
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| End bp | 3420798 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643806208 |
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| Product | sigma54-dependent activator protein |
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| Protein accession | YP_002800472 |
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| Protein GI | 226945399 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAAT GCCATACCGA TCTGTTGCCG CTGCTCGGCG AACTGGGGCG CATCCCCAGC
GAGGGCAGCG ACCTGGCCGG CATCCTGCGG GTGCTGCTGG AGCTGATGCA GCGCCATTTG
AAGATGGCGC GTGGCATGGT GACCCTGCGC GATCCGGAGT CGGGGCGGAT CTTCGTCCAG
CAGGGCTGCG GCCTGAGCGA GGAGGAGGAG GCCTCGGGCT ACCTCGCTCT CGGCGAGGAT
ATCGTCGCCC AAGCGGTGGA CAGCGGGCGG ACGGTGGTAC TGCCCGGCGA AGCGGGCAAC
CAGTCCCTCC TCTGCGTGCC GATCCGCCGC GACCGCAAGG TGCTGGGCAC CATCGTCGCC
GAGCGCCATT ACGCCAACCG CCGGATGCTC GAGCTGGACG CGGAGATTCT CGCCATTCTC
GCCGCCCTCA CCGCCCAGGC GGTGGAGCTG CACCTGCAGG AGCACGTGCG CAAGGTCGCC
CTGGAGGACG AGAACCACCG TCTGCATTCA GCCTTGCAGA GCCGTTTCAA GCCCAGCAGC
ATCATCGGCA GCTCGCGGCC GCTGCAGGAA GTCCATAGGC TGATCGAGAA GGTCGCCCGC
TCGCGGGCCA CGGTGCTGAT CCTCGGCGAG AGCGGCGTGG GCAAGGAACT GGTAGCCAGT
GCCATCCACT ACAACGGCAG CAATGCCGAA GGGCCCTTCG TCAAGTTCAA CTGCGCCGCC
CTGCCGGAGA GCGTCATCGA GAGCGAGCTG TTCGGCCATG AGTACGGCGC CTTCACCGGA
GCGGCGACCC CGCGGCGCGG GCGCTTCGAG GCGGCCGACG GCGGCACCAT CTTCCTCGAC
GAGGTGGGCG AGCTGTCCCC GGCCATGCAG GCCAAGCTGC TGCGGGTGCT GCAGGAGAAG
AGCTTCGAAC GGGTCGGCGG CAACGTCACC CACCAGGTCG ACCTGCGCAT CCTCGCCGCC
ACCAGTCGCG ACCTGCGGGC GATGGTCGAG CAGAGCCGCT TCCGCGGGGA CCTCTACTAC
CGGCTCAACG TCTTCCCCAT CAGCGTGCCG CCGCTGCGCG AACGCGACTC CGACATCGCC
ATCCTGGCGG AGCATTTCGT CGCGCGCCTC TCCAGCAGGA TGGGCATCCC GGCGAAGCGC
ATTTCCACAC CGGCAATGGG CATGCTGATG TGCTACCACT GGCCGGGCAA CGTGCGCGAG
CTGGAGAACG TCATCGAGCG GGCGGTCCTT CTCTGCGAGG GTGCAGTCAT CGAACCGCAC
CATCTGCCGC CTTCGCTGCA GACCCCGGCG GTTTCCGAGA GCCCGTCCGC CGGCGGCATT
CTCGACGTCC GGCTGGGACA GGCCGAGTGT GAACTGATCG CCGAGGCGCT CAAGCGGCAC
AAGGGCAACA TGACCGAGTC CGCCGCCCAC CTGGGCCTGA CCCGGCGCGT CCTCGGCCTG
CGCATGGCCC GGCACAACCT GAACCACAAG GAGTTTCGGT GA
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| Protein sequence | MGECHTDLLP LLGELGRIPS EGSDLAGILR VLLELMQRHL KMARGMVTLR DPESGRIFVQ
QGCGLSEEEE ASGYLALGED IVAQAVDSGR TVVLPGEAGN QSLLCVPIRR DRKVLGTIVA
ERHYANRRML ELDAEILAIL AALTAQAVEL HLQEHVRKVA LEDENHRLHS ALQSRFKPSS
IIGSSRPLQE VHRLIEKVAR SRATVLILGE SGVGKELVAS AIHYNGSNAE GPFVKFNCAA
LPESVIESEL FGHEYGAFTG AATPRRGRFE AADGGTIFLD EVGELSPAMQ AKLLRVLQEK
SFERVGGNVT HQVDLRILAA TSRDLRAMVE QSRFRGDLYY RLNVFPISVP PLRERDSDIA
ILAEHFVARL SSRMGIPAKR ISTPAMGMLM CYHWPGNVRE LENVIERAVL LCEGAVIEPH
HLPPSLQTPA VSESPSAGGI LDVRLGQAEC ELIAEALKRH KGNMTESAAH LGLTRRVLGL
RMARHNLNHK EFR
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