Gene Avin_33280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_33280 
SymbolpcpS 
ID7762223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3401249 
End bp3401959 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content74% 
IMG OID643806193 
Product4-phosphopantetheinyl transferase protein 
Protein accessionYP_002800457 
Protein GI226945384 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.398215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTCC AGAGCCCCCT GCCCCCCTGC CTGAGCGAGC CGAGCGCGCA CTGGCCGCTG 
CCTCTGGCGC TGCCCGCCAC CGCGCTCCAT AGCGCCCGCT TCGACCCGGC CCTGTTGCAG
GCCGCCGACT TCACCGCCTG CGGCATCGCG CCGGTGCGCG GCGTGGCCAA GCGCCAGGCC
GAATACCTGG CCGGCCGCCT CTGCGCGCGC CAGGCCCTGC AGCGACTGAC CGGCACGCCC
GGCGTACCGG CGGTCGGCGA GGACCGCGCG CCGCAGTGGC CGGCCGGGGT GGTCGGCTCC
ATCACCCACG GCGACGGCTG GGCCGCCGCC CTGGTCGGAC GGGCCGACGC CTGGTCCGGC
CTGGGGCTGG ACACCGAACT CCTGCTGCCG GCCGAACGCG CCCGGCACCT GGCCGAACAC
ATCCTCACCC CCGCCGAACT CGGGCGCCTG AGCGGCACGC CCGAGGCGCA GGCCTGGCTG
ACCAGCCTGA CCTTCTCTCT CAAGGAGAGC CTGTTCAAGG CGCTCTATCC GCTGGTCCGC
CAGCGTTTCT ATTTCGAGCA TGCCGAACTG CTCGACTGGA CTCCCGCCGG AACGGCCCGC
CTGCGCCTGC TCCAAGGCCT CGGTCCGGAC TGGCCGGCCG GCAGCCTGCT CGAAGGCCAG
TTCGCCTGCG AGAACGGGCG CCTGCTGACC CTGGTCGCCA TCCCCGCCTG A
 
Protein sequence
MTFQSPLPPC LSEPSAHWPL PLALPATALH SARFDPALLQ AADFTACGIA PVRGVAKRQA 
EYLAGRLCAR QALQRLTGTP GVPAVGEDRA PQWPAGVVGS ITHGDGWAAA LVGRADAWSG
LGLDTELLLP AERARHLAEH ILTPAELGRL SGTPEAQAWL TSLTFSLKES LFKALYPLVR
QRFYFEHAEL LDWTPAGTAR LRLLQGLGPD WPAGSLLEGQ FACENGRLLT LVAIPA