Gene Avin_33180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_33180 
Symbol 
ID7762213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp3392292 
End bp3392909 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID643806183 
ProductNLP/P60 family lipoprotein 
Protein accessionYP_002800447 
Protein GI226945374 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.38174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATC GTCTCGCAAC CCTCGTGCCC CTGGCGCTCG CCGTCTTCCT GACCGGCTGC 
GCGGGGCAGG CTCTGCAGCA GGAATTCGCC GCTCCCGAGC GGGTATCCCT GATCCAGGAG 
CCCAGCCAAA AGGATCTGGC CGCGTTGAAC GACGGCTACC GTCTGCCGGC ACTGGCCGAC 
AGCATTCTGG TCCGCGGTTT CGGCCTGCTC GGCACGCCCT ACCGCTACGG TGGCAGCTCG 
GCAGTCACCG GTTTCGACTG CAGCGGCTTC ATCGGCTACC TGTTCCGCGA AGAGGCGGGC 
ATCAAGCTGC CGCGTTCGAC CCGCGAGATG ATCACCCTCG ATGCGCCCCG CGTGGCCCGC 
AACGAGCTGC AGGCCGGCGA CCTGATCTTC TTCAACAACC GTGGCCGTGG CCAGGTCAAC 
CATGTCGGCG TCTACATCGG CAACGGTCGT TTCCTGCATT CCGCCAGCCG TCGCAGCGGC 
GGCGTGCGAG TGGACAGCCT GCAGAACTCG TACTGGAGTT CCAGCTACCT GCAGGCCAAG 
CGCGCCCTGG TGCTGGCGTC CGAAAGCAAG CAGGCGCAGG CCGGCCGTTC CCTGGTGTTG 
GCCGCACAGC ACGACTGA
 
Protein sequence
MLNRLATLVP LALAVFLTGC AGQALQQEFA APERVSLIQE PSQKDLAALN DGYRLPALAD 
SILVRGFGLL GTPYRYGGSS AVTGFDCSGF IGYLFREEAG IKLPRSTREM ITLDAPRVAR 
NELQAGDLIF FNNRGRGQVN HVGVYIGNGR FLHSASRRSG GVRVDSLQNS YWSSSYLQAK 
RALVLASESK QAQAGRSLVL AAQHD