Gene Avin_33170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_33170 
Symbol 
ID7762212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3391636 
End bp3392157 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content73% 
IMG OID643806182 
ProductNLP/P60 family lipoprotein 
Protein accessionYP_002800446 
Protein GI226945373 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0857869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCC AGGCCCGCCT TCTCGTCCCT ATCCTGCTCG CCGTGCTGCT CGCGGCCTGT 
TCCGCCCGTT CTCCCTCGCC CAAGGCTCCG TCCGCTGGCG CTCCTCCCGC TTCGCCACAG
GCGGAGGACG TGCTGGTTCG CGCCCTCGGG CTGGTCGGCA CGCCCTATCG CTGGGGCGGC
AATACCCCGG ATTCCGGATT CGACTGCAGC GGTCTGATCG GTTATGTCTA CCGCGAGGCG
GCGGGCATCC GCCTGCCGCG CTCGACCCGC GAGATGCTCG CCATGGGGGC GCCCAGCGTG
CATTCCGGGG CCCTGCGCAG CGGCGACCTG GTGTTCTTCG CCACCGGCGG CGGTGGCCGG
GTCAGTCATG CCGGCATCTA CGTGGGCGAG GGGCGCTTCG TGCACGCTCC CTCCAGCGGC
GGCACCGTGC GGCTGGATCG TCTGTCCGAC GACTACTGGC GCGCCCGCTA CCTGGGCGCC
AGGCGCGTGC TGCGCGCCAT GCCCGTGGCG CGCCAGCCCT GA
 
Protein sequence
MPAQARLLVP ILLAVLLAAC SARSPSPKAP SAGAPPASPQ AEDVLVRALG LVGTPYRWGG 
NTPDSGFDCS GLIGYVYREA AGIRLPRSTR EMLAMGAPSV HSGALRSGDL VFFATGGGGR
VSHAGIYVGE GRFVHAPSSG GTVRLDRLSD DYWRARYLGA RRVLRAMPVA RQP