| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_32710 |
|---|
| Symbol | |
|---|
| ID | 7762169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3350504 |
|---|
| End bp | 3350986 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643806139 |
|---|
| Product | antisigma-factor antagonist STAS domain protein |
|---|
| Protein accession | YP_002800403 |
|---|
| Protein GI | 226945330 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTG GGAAAATCCA GTTCGCCGAG CAAAGCGGCA CCTTCGTCCT CAAGTTCGTC
GGAGAAATCC GGCTGACCTT GTGTTCGGCT CTGGATGACA CTATCGAGCG GATCTTCGCT
GCCCTCAACT TCTCCGCTAT TGTCATCGAC CTGACCGAAA CTCAGAGCAT CGACAGTACT
ACCCTGGGGC TTCTGGCCAA GCTTTCGATT CTCTCCCGGC AAAAGGTCGG CATGTTGCCG
ACAGTGGTGA CGACCCATCC GGACATCACC CGCCTGCTGC AGTCGATGGG CTTCGATCAG
GTATTCAACA TCGTCGATCG CCCGGTTCCC TGTCCCGAAT GTCTTTCCGA ACTACCTTCC
CAGGACCAGT CGGAAGAGGT GGTCAAGGCC AAGGTGCTGG AAGCGCACCG CATCCTCATG
GGGCTGAACG AGTCCAACCG GGAGGCTTTC CACGATCTGG TCAGCGCTCT CGAGCGCCAG
TAA
|
|---|
| Protein sequence | MSIGKIQFAE QSGTFVLKFV GEIRLTLCSA LDDTIERIFA ALNFSAIVID LTETQSIDST
TLGLLAKLSI LSRQKVGMLP TVVTTHPDIT RLLQSMGFDQ VFNIVDRPVP CPECLSELPS
QDQSEEVVKA KVLEAHRILM GLNESNREAF HDLVSALERQ
|
|---|
| |