Gene Avin_32360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_32360 
Symbol 
ID7762135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3327773 
End bp3328543 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID643806106 
ProductCarboxymuconolactone decarboxylase protein 
Protein accessionYP_002800370 
Protein GI226945297 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCT TTCCCTCCCT GATTCCCGCC TTGTTGTTCG CCACCTCCTT GCAGGCGAAC 
GCGCAGAGCG CGGTGCCGGA TACCCCGGCC GCGCGTCAGG CCCGCGAGAC CGCGCCGCAA
CTCTTCGCCT ATACGCAGGA TGTCCTGTTC GGCGACGTGT GGAAACGCAA GGAACTCGCA
CCGCGCGATC GCAGCCTGGT CACGCTGTCC TCCCTGCTGG CAAACGGCCA GGGTGCGCAG
ATGACCTCGC ACATCAACCT GGCGCTGGAC AACGGCGTGA AGCCCAGCGA GATCATCGGG
CTCATCACCC ATCTGGCCTT CTACACCGGC TGGCCGAACG GCATGAGCGC GGTCGGCGTG
GCGAGGGACG TCTTCGCCAA GCGCGGGATT GATCCCAGCC AATACCGCTC CCCATCGGCG
GAACTGCTGC CGGTCGATGA CGCCGCCGAG GCCAAGCGTG CGGCGACGGT CAAGGCCAAC
GTCGAGCCGG TTGCACCGGC GCTGGCACGC TACACCGACG ACGTGCTGTT CGCAGACCTC
TGGCGACGGC CGGACCTGAC GCCGCGCGAT CGCAGCCTGA TCACGGTGGC GGCGCTCATC
GCCCGCGGCC AGCTCGACCA GGTTGCCTAT CACCTGAACC GGGCCATGGA CAGCGGCTTG
ACGCAGACGC AGGCCACCGA AGTCGTCACG CACCTGGCTT TCTATGCCGG TTGGCCGCGC
GCCATGTCGG CCCTGCCGAT CCTGCAATCG GTGTTCGCGG AGAGGAAATG A
 
Protein sequence
MKPFPSLIPA LLFATSLQAN AQSAVPDTPA ARQARETAPQ LFAYTQDVLF GDVWKRKELA 
PRDRSLVTLS SLLANGQGAQ MTSHINLALD NGVKPSEIIG LITHLAFYTG WPNGMSAVGV
ARDVFAKRGI DPSQYRSPSA ELLPVDDAAE AKRAATVKAN VEPVAPALAR YTDDVLFADL
WRRPDLTPRD RSLITVAALI ARGQLDQVAY HLNRAMDSGL TQTQATEVVT HLAFYAGWPR
AMSALPILQS VFAERK