| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_31690 |
|---|
| Symbol | |
|---|
| ID | 7762069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3278569 |
|---|
| End bp | 3279498 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643806043 |
|---|
| Product | Sigma54 -dependent activator protein |
|---|
| Protein accession | YP_002800307 |
|---|
| Protein GI | 226945234 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTC ATCTTCCAGC CGGCCAGCCG CTGCTGACTT TCCCCGATGC CGACAAGAGC
CCGCTGAGCA TTCGCGCCAA GGCGCTGGTA TTCGTCGATC CCCGTTCGCG CAAGTTGCGC
GACGAAGTGG AGCGCCTCGC GCCGACCGGC CTGCCAGTGT TGATCCGCGG CGAAAGCGGC
ACCGGCAAGG AGTTGCTGGC CCGGCAGATC CATCGCGAAA GCGGACGCGG CGGCCTGTTC
GTCGCGGTCA ACTGCGGCGC GCTCAGCCCG ACCTGGGCCG AGGCCGAGCT GTTCGGCCAC
GCCGCCGGGG CTTATGCCGG TTCGGCCTGC AGCCGTGCCG GGTGGTTCGG CTCGGCCAAC
GGCGGCACTC TCTACCTGGA CGAGATCGGC GACCTGCCGC TGGGCCTGCA GGGCAAGCTG
CTTGCCGCCC TGGAGACCCG CGAGGTGCTG CGTGTCGGCA CGCAGCAGCC GACGCCGGTG
GACGTGCGCC TGGTGGCGGC CAGCAGCGTG GATCTGGCCC AGGCGGTGGC CGCCGGCAAG
TTCAACGAGC GGCTCCACCG CTATCTCGAT GAAGGGCGTC TGGAACTGCC GGCGCTGCGC
GAGCGGCCGG GGGATATCCT GCCGCTCGCC GAATACTTTC TCGGGGTTTA CGCCCAGCGC
CTGGGGCTGC CCCTTCCACA GCTCGGCACG GCGGCCCAGT TCGCCCTGGA GCGCTATTCC
TGGCCGGGCA ACACCCGCGA ACTGGAGAGC GTCATCCACT TCGCCCTGCT GGTCTGCAGC
GACGACGAGA TCCTCCCGGA CCACCTCAAT CTGCCGGGCG CCGGGGCGCC GTTGCACACG
CCGCTGACCA TCATCGAGGA ACAACTGGCT CGGCTCGACG CCCATGAGCG AGCGCATCTG
CGGGCCCTGC TGGCCCGGCC GGATATCTGA
|
|---|
| Protein sequence | MTLHLPAGQP LLTFPDADKS PLSIRAKALV FVDPRSRKLR DEVERLAPTG LPVLIRGESG
TGKELLARQI HRESGRGGLF VAVNCGALSP TWAEAELFGH AAGAYAGSAC SRAGWFGSAN
GGTLYLDEIG DLPLGLQGKL LAALETREVL RVGTQQPTPV DVRLVAASSV DLAQAVAAGK
FNERLHRYLD EGRLELPALR ERPGDILPLA EYFLGVYAQR LGLPLPQLGT AAQFALERYS
WPGNTRELES VIHFALLVCS DDEILPDHLN LPGAGAPLHT PLTIIEEQLA RLDAHERAHL
RALLARPDI
|
|---|
| |