Gene Avin_31630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_31630 
Symbol 
ID7762063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3272190 
End bp3274175 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content64% 
IMG OID643806037 
ProductCRISPR-associated helicase Cas3 
Protein accessionYP_002800301 
Protein GI226945228 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCGG TCGAGCGCTA TGGGGCGCTG GGGCGGCTTT TGGCCTACGG GATTGCCGGG 
CATCACTCCG GGCTGGCCAA TGGCCGCGAT CCGGGCGAGT GCAGCACGCT GGAGGAGCGG
CTCAAGGGGC AGAGCCTTCC AGCGCTACTG GATCAGTGGC AGAACGAAAT CCAGTTGCCT
GCGATGTCAG AACTGGGGCC GCTGCCGATC AAACCGGTCA GGGAACGTCA GGTGTTTCAG
CTGGCCTTTC TGGCCCGCAT GCTGTTCTCC TGCCTGGTCG ATGCCGACTT TCTCGATACC
GAGGCTTATT ACGACAGAAT CGAGCAACGC CCGTCGCGCC GATCTGCACG ACCTTCATTG
CCGCACCTGC AGCAGGCACT GAATGTCCAT CTGGCGGGCT TTCGCGCCGA CTCGCCAGTC
AACCGCATCC GTGCCGACAT CCTCGGCCAT GTGCGCCAGC AGGCAGTACA GGAGCCGGGA
CTGTTCTCGC TGACCGTGCC CACCGGTGGC GGCAAGACGC TGGCCTCGCT GGCCTTCGCG
CTGGATCACG CCATCCGCCA TGGCCTGCGT CGCATCATCT ATGTGATTCC TTTCACCAGC
ATCGTCGAAC AGAACGCCGC CGTGTTCCGC AAGGCGCTGG GCGAGTTCGG CGAGCAGGCG
GTGCTGGAGC ATCACAGCGC CTTCAGCGAT AACCGCGCGC AAGATCGGCA GGCCCGCGAC
AAGCTGCGCT TGGCGATGGA GAACTGGGAT GCACCGATCA TCGTTACCAC GGCCGTGCAG
TTCTTCGAGA GTCTGTATGC CGACCGGCCC TCGCGTTGTC GCAAGCTGCA CAACATCGCC
GGCAGCGTGA TCATCCTCGA CGAGGCGCAG ACTTTGCCGC TGCGCCTGTT GCGCCCCTGT
GTGACCGCCA TCGACGAGTT GGCGCTCAAC TACCGCTGCA GCCCGGTGCT TTGTACCGCC
ACCCAGCCGG CGCTGCAGGC CCCGGAATTC CGGGGCGGGC TGCAGGGTGT GCGCGAGCTG
GCTCCGCAGC CAGAGCAACT GTTCCAGCGA CTGGTGCGGG TACAGGTCCG CCAAGTGGGT
ATTCTCAGCG ATGCCGCACT GCAACGGCAG ATGGCCGAGC GTGAGCAGGT GCTGTGCATC
GTCAATAATC GCCGGCATGC CCGCGCCCTG TATGAGTCGA TAGCCGGCAG TGACGGGGCG
CGGCATCTGA CCACCCTGAT GTGCGCCCGC CACCGCAGTC AGGTGCTGGC CGAGGTGCGC
CAGCGCCTGC ACGATGGCCA GCCTTGCCGG CTGGTGGCCA CCTCGCTGAT CGAGGCGGGC
GTGGATGTGG ATTTCCCGAC GGTGCTGCGC GCCGAAGCCG GACTGGATTC GATTGCCCAG
GCGGCCGGGC GCTGCAACCG AGAGGGGCTG CGGGCTCTGG AGGCCAGTGA GGTGCTGGTG
TTCCAGGCGG AAAATCCGGA CTGGAAGGCT CCGCAAGACC TGCAGCAGTT CGCTCAGGCG
GCGCGCGAGG TGCTGCGCAA TACCACTGGT GATCCGTTGG CACCGGGAGT CATTACCCGT
TACTTCCAGC ATTTGTACTG GCAGAAGGGT GACAGGGAGC TGGATGCCAA GGACCTGCTG
GCGCAGATCG AAAGCAAGCG GTTGGAAGGG ATTCCATTCG AGATGCTGGC CCGCGAGTTC
CGCATGATCG ACAGCATGCA GTGCCCGGTC ATCATTCCCT TCGATGACGA GGCGCAGGAG
TCGCTGCGGG CGCTGGAGTT TGCCGACGGC TGCGGTGAGC TGGCGCGTCA GTTGCAGCCC
TATATCGTGC AACTGCCCCG ACAGGGCTAC GACGCCTTGC TGAAGGCCGG AGCCATCCAG
CCGGTGGCCC CGGAGCGTTA TGCCGAGCAG TTCATGCAGT TGGTCAACCC TGACCTATAT
CATGCGCAGT ACGGGTTGCA CTGGGATAAT CCGACGTTTA TGGATGTTAC TAACCTCGTT
ATATAA
 
Protein sequence
MLAVERYGAL GRLLAYGIAG HHSGLANGRD PGECSTLEER LKGQSLPALL DQWQNEIQLP 
AMSELGPLPI KPVRERQVFQ LAFLARMLFS CLVDADFLDT EAYYDRIEQR PSRRSARPSL
PHLQQALNVH LAGFRADSPV NRIRADILGH VRQQAVQEPG LFSLTVPTGG GKTLASLAFA
LDHAIRHGLR RIIYVIPFTS IVEQNAAVFR KALGEFGEQA VLEHHSAFSD NRAQDRQARD
KLRLAMENWD APIIVTTAVQ FFESLYADRP SRCRKLHNIA GSVIILDEAQ TLPLRLLRPC
VTAIDELALN YRCSPVLCTA TQPALQAPEF RGGLQGVREL APQPEQLFQR LVRVQVRQVG
ILSDAALQRQ MAEREQVLCI VNNRRHARAL YESIAGSDGA RHLTTLMCAR HRSQVLAEVR
QRLHDGQPCR LVATSLIEAG VDVDFPTVLR AEAGLDSIAQ AAGRCNREGL RALEASEVLV
FQAENPDWKA PQDLQQFAQA AREVLRNTTG DPLAPGVITR YFQHLYWQKG DRELDAKDLL
AQIESKRLEG IPFEMLAREF RMIDSMQCPV IIPFDDEAQE SLRALEFADG CGELARQLQP
YIVQLPRQGY DALLKAGAIQ PVAPERYAEQ FMQLVNPDLY HAQYGLHWDN PTFMDVTNLV
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