Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_31600 |
Symbol | csd2 |
ID | 7762060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3268501 |
End bp | 3269409 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643806034 |
Product | CRISPR-associated protein Csd2 |
Protein accession | YP_002800298 |
Protein GI | 226945225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family [TIGR02589] CRISPR-associated protein, Csd2 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA TCGCCAACCG TTACGAATTT GTCTATCTGT TCGAAGTCAC CAACGGCAAC CCGAATGGCG ATCCGGACGC CGGCAACCTG CCGCGCCTCG ACCCGGAAAC CAATCAGGGG CTGGTCACGG ATGTCTGCCT CAAGCGCAAA ATCCGTAACT ATGTGGCACT GGAAAAGTCC GATGCCGAAG GCAAGCCCGA GCAGAGTTAT GTCATCTACA TGCAGGAAAA GGCTGTGCTG AACCAGCAGC ATGAGCAAGC CTGGAAAGCA TGCGAAATTC CGCCGGATGC CAAAAATGGC TACAAGAAGT TGCCTGCCGA TACGGCCAAG GCCAAAAGCT TGACGGACTG GATGTGCAGT AACTTCTTTG ATGTACGCGC CTTTGGCGCG GTGATGACGA CGGGTGTCAA CTGCGGTCAG GTACGCGGGC CGATCCAACT GGCCTTTGCC ACCTCGATTG ATCCAATCAT CCCGCTGGAA GTCTCCATTA CTCGTATGGC CGTGACCACC GAGAAGGAGG CAGAAGAGCA GAGCGGTGAC AACCGCACCA TGGGCCGCAA GCACATCATC CCCTATGGCC TGTACCGCGC CCACGGCTTC ATCTCCGCCA AGCTGGCCGA GCGTACCGGC TTCTCCGAGG ATGACCTTGC ACTGTTGTGG CGGGCGCTGG AAAACATGTT CGAGCACGAC CGCTCGGCCG CACGCGGTGA AATGGCGGCG CGCAAGCTGA TCGTGTTCAA GCATGAGCAT CCGATGGGCA ATGCGCCGGC ACACAAGTTG TTCGATCTGG TCAAGGTGGC GCGCACGGAG GGCGAGGCCG ACACCCCGGC CCGCAGCTTT GCCGACTATC AGATCAGCAT CGACCGTGAC GGGCTGCCAG CCGGAGTCAG CGTGCAGGAA TACCTGTAA
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Protein sequence | MSAIANRYEF VYLFEVTNGN PNGDPDAGNL PRLDPETNQG LVTDVCLKRK IRNYVALEKS DAEGKPEQSY VIYMQEKAVL NQQHEQAWKA CEIPPDAKNG YKKLPADTAK AKSLTDWMCS NFFDVRAFGA VMTTGVNCGQ VRGPIQLAFA TSIDPIIPLE VSITRMAVTT EKEAEEQSGD NRTMGRKHII PYGLYRAHGF ISAKLAERTG FSEDDLALLW RALENMFEHD RSAARGEMAA RKLIVFKHEH PMGNAPAHKL FDLVKVARTE GEADTPARSF ADYQISIDRD GLPAGVSVQE YL
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