| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_31570 |
|---|
| Symbol | cas2 |
|---|
| ID | 7762057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3266532 |
|---|
| End bp | 3266819 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643806031 |
|---|
| Product | CRISPR-associated protein Cas2 |
|---|
| Protein accession | YP_002800295 |
|---|
| Protein GI | 226945222 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTTC TGGTGAGCTA TGACGTGAGC ACCGAAGGCG ACGGTGCCCG CCGCCTGCGT
CGCGTCGCCC GCGCTTGCCT CGACTATGGC CAGCGCGTCC AGTATTCGGT GTTCGAGATC
GAGGTCGACC CGGCTCAGTG GGTGTTGCTC AAGAGCCGGC TGTGCGAATT GATCGACCCG
GAAGTCGACA GCCTGCGCTT CTACTACCTG GGCCGGAACT GGCAGAACCG GGTCGAGCAC
GTCGGTGCCA AACCTGTACT CGACCTGAAT GGCCCGCTGA TCCTCTGA
|
|---|
| Protein sequence | MMVLVSYDVS TEGDGARRLR RVARACLDYG QRVQYSVFEI EVDPAQWVLL KSRLCELIDP
EVDSLRFYYL GRNWQNRVEH VGAKPVLDLN GPLIL
|
|---|
| |