Gene Avin_31390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_31390 
Symbol 
ID7762038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3245312 
End bp3246289 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID643806013 
ProductABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein 
Protein accessionYP_002800277 
Protein GI226945204 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.356097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCC CCATCCTGTT CGCCGCACTG GCGGCCCTGT TCCTGCACGG CGCCCAGGCC 
GCCGAGCCGC TGACCCTGCG CATCGCCGAC CAGAAGGGCA ACATGCGCGC CCAACTGGAA
GCGGCCGATG CATTGAAGGA TCTGCCCTAC GTCATCCAGT GGGCGGAGTT CCCCGCCGCC
GCGCCGCTGG CCGAAGCCCT CAACGCCGGC GCGGTGGACG CCGGGATCAT CGGCGACGCG
CCGCTGCTGT TCGCCCTGGC CGCCGGCGCC CAGGTCAAGG CCATCGCGGT GAACAAATCC
AACCCCTACG GCACCGCGCT GCTGGTGCTC GAGGACAGCC CGCTGCGCGG CGGCGCCGAT
CTCAAGGGCA AGCGCATCGC CACCGGACGC GGCTCGATCG GCCACTTCGT CGCCCTCAAG
GCACTGGAAA AGGCCGGCCT GACCGAACAG GACGTGGAAT TCCGCTTTCT CGGCCCGGTG
GACGCGAAGA TCGCCCTGGC CAACGGCGCG GTGGACGTCT GGTCGACCTG GGAGCCCTAC
ACCGCGCAGA TGGAAACCAG CGGCCAGGGC CGGGTACTGG TCGACGGCCG CGGCCTGTGG
GCCGGCAACA GCTACCTCGC CGCCACCGAC AAGGCACTGG CCGACCCGGC CCGCCGCGAG
GCCCTGCAGG ATTACCTGCA GCGTCTGAGC GGCGCCCAGC GATGGGCCTA CGCGCACCTC
GACGACTACG CCAAGACCCT GGCACGCATC ATCGGCTTCC CCGAGGACGC GGCCCGGCTG
TCCTTCGCCC GCCGCGAGCT GCGCTGGCAG ACGCTGGACG AGGCGACCAT CGCCCAGCAG
CAGGAGACCG CCGATTTCTA CCAGGCCCAT GCCCTGCTGC CCAAGCGCCT GGACGTGGCG
CCGACCTTCG ACCACAGCTT CCGGATCGAT CCGGCCGCAC AACCGGCGAG CCTGGCCCGA
CAGCCGGCCA AGCCCTGA
 
Protein sequence
MKRPILFAAL AALFLHGAQA AEPLTLRIAD QKGNMRAQLE AADALKDLPY VIQWAEFPAA 
APLAEALNAG AVDAGIIGDA PLLFALAAGA QVKAIAVNKS NPYGTALLVL EDSPLRGGAD
LKGKRIATGR GSIGHFVALK ALEKAGLTEQ DVEFRFLGPV DAKIALANGA VDVWSTWEPY
TAQMETSGQG RVLVDGRGLW AGNSYLAATD KALADPARRE ALQDYLQRLS GAQRWAYAHL
DDYAKTLARI IGFPEDAARL SFARRELRWQ TLDEATIAQQ QETADFYQAH ALLPKRLDVA
PTFDHSFRID PAAQPASLAR QPAKP