Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_31390 |
Symbol | |
ID | 7762038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3245312 |
End bp | 3246289 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643806013 |
Product | ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein |
Protein accession | YP_002800277 |
Protein GI | 226945204 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.356097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCC CCATCCTGTT CGCCGCACTG GCGGCCCTGT TCCTGCACGG CGCCCAGGCC GCCGAGCCGC TGACCCTGCG CATCGCCGAC CAGAAGGGCA ACATGCGCGC CCAACTGGAA GCGGCCGATG CATTGAAGGA TCTGCCCTAC GTCATCCAGT GGGCGGAGTT CCCCGCCGCC GCGCCGCTGG CCGAAGCCCT CAACGCCGGC GCGGTGGACG CCGGGATCAT CGGCGACGCG CCGCTGCTGT TCGCCCTGGC CGCCGGCGCC CAGGTCAAGG CCATCGCGGT GAACAAATCC AACCCCTACG GCACCGCGCT GCTGGTGCTC GAGGACAGCC CGCTGCGCGG CGGCGCCGAT CTCAAGGGCA AGCGCATCGC CACCGGACGC GGCTCGATCG GCCACTTCGT CGCCCTCAAG GCACTGGAAA AGGCCGGCCT GACCGAACAG GACGTGGAAT TCCGCTTTCT CGGCCCGGTG GACGCGAAGA TCGCCCTGGC CAACGGCGCG GTGGACGTCT GGTCGACCTG GGAGCCCTAC ACCGCGCAGA TGGAAACCAG CGGCCAGGGC CGGGTACTGG TCGACGGCCG CGGCCTGTGG GCCGGCAACA GCTACCTCGC CGCCACCGAC AAGGCACTGG CCGACCCGGC CCGCCGCGAG GCCCTGCAGG ATTACCTGCA GCGTCTGAGC GGCGCCCAGC GATGGGCCTA CGCGCACCTC GACGACTACG CCAAGACCCT GGCACGCATC ATCGGCTTCC CCGAGGACGC GGCCCGGCTG TCCTTCGCCC GCCGCGAGCT GCGCTGGCAG ACGCTGGACG AGGCGACCAT CGCCCAGCAG CAGGAGACCG CCGATTTCTA CCAGGCCCAT GCCCTGCTGC CCAAGCGCCT GGACGTGGCG CCGACCTTCG ACCACAGCTT CCGGATCGAT CCGGCCGCAC AACCGGCGAG CCTGGCCCGA CAGCCGGCCA AGCCCTGA
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Protein sequence | MKRPILFAAL AALFLHGAQA AEPLTLRIAD QKGNMRAQLE AADALKDLPY VIQWAEFPAA APLAEALNAG AVDAGIIGDA PLLFALAAGA QVKAIAVNKS NPYGTALLVL EDSPLRGGAD LKGKRIATGR GSIGHFVALK ALEKAGLTEQ DVEFRFLGPV DAKIALANGA VDVWSTWEPY TAQMETSGQG RVLVDGRGLW AGNSYLAATD KALADPARRE ALQDYLQRLS GAQRWAYAHL DDYAKTLARI IGFPEDAARL SFARRELRWQ TLDEATIAQQ QETADFYQAH ALLPKRLDVA PTFDHSFRID PAAQPASLAR QPAKP
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