Gene Avin_31180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_31180 
Symbol 
ID7762018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3222480 
End bp3223799 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content66% 
IMG OID643805993 
ProductOprE-like outer membrane porin 
Protein accessionYP_002800257 
Protein GI226945184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC GCCGGCGCGG CGGTTTGACG CTTTCCTGCC TGGGCCTTTT GCCCTTCGGC 
CAGGCCGGTG CCGCCGGCTT CATCGAGGAC AGCAAGGCCA CGCTGAGCCT CAAGAACTTC
TACATCAACC AGGACGTCCG CAACCAGGAC GCGCCGCGCT CCGAGGAGTG GGGCCAGGCG
TTCTTCCTCG ACTACAAGTC CGGCTTCACC GAGGGTCCGG TCGGCTTCGG CCTCGACGTG
CTGGCCATGC ACGCCATCCG CCTCGACGGC GGCGGCCGCT CCGGCAAGGC GGACATCGAA
CGCACCCCGG GCGGCATGTT CCCGCTGGAA AGCAACGGCA AGGGCAAGAC CGACTTCGGC
CGCGTTGGCG TGACCGGCAA ACTGCGCTTC TCCAAGACCG AGGCGCGCCT CGGCACCCTG
CTGCCGAAGA TGCCGGTGCT GGTCTACAAC GACGGCCGCC TGCTGCCGCA ACTGTTCCAT
GGCGCGCAGA TCACTTCCAA CGAGATCGAC AACCTGAGCC TGACCGCCGG CAAGATCGAA
CACTCGACCG AGCGTAACTC CGGCGACAGC CACGGCCTGT CCATCGGCGG CGCCAACAGC
GGCAGCAGGG CGCAGTTCAG CAACGAGTTC TACTTCGCCG GCGCCGACTA CAAGGCCACC
AAGGACCTCC TGCTGCAGTA CTACTACGGC AACCTGCGCG ACTTCTACAA ACAGCACTTC
TTCGGCCTGG TGCACGACTG GAAGCTGCCG GTGGGTTCGC TGAAGACCGA CCTGCGCTAC
TTCTACAGCG ACTCCGACGG CAAGAACGAG AGCGCCTCCG GACGTGCCGA GGGCTATGTC
AGCAGCGGCG CCGACGGCAG CAGCGGCGAG GTCGACAACA ACCTGTGGAG TGCGATGTTC
ACCTACAGCC TGGCCGGTCA CGCGCTGAGC CTCGGCTACC AGAAGGTCAG TGGCGACAGC
GACTTCCCGC ACATCAACCT GGGGAGCGGG CGCACCCTGC ATCTGATCAC CAACGGCCAG
ATCGGCAAGT TCGCCAGCGC CGGCGAGAAC ACCTGGGTGG CCGGCTACGC CTACGACTTC
GCGGCGATCG GCGTGCCGGG GTTGAAGACC AAGCTGATCT ACTTCAGCGG CGACGACATC
GACGCCGCCG GCAGCGACAA CAAGGAGTGG GAACGCAACT TCCGCATCGA CTACGCGGTG
CAGAGCGGCC CGCTCAAGGG CGTCGGCCTC GCCTGGCTCA ATGCCGCGAC CCGTGGCAAC
GATGGCCGCG ACCTGGACGA GAATCGCCTG ATGCTCACCT ACAGTCTGCC GTTGCTTTGA
 
Protein sequence
MSERRRGGLT LSCLGLLPFG QAGAAGFIED SKATLSLKNF YINQDVRNQD APRSEEWGQA 
FFLDYKSGFT EGPVGFGLDV LAMHAIRLDG GGRSGKADIE RTPGGMFPLE SNGKGKTDFG
RVGVTGKLRF SKTEARLGTL LPKMPVLVYN DGRLLPQLFH GAQITSNEID NLSLTAGKIE
HSTERNSGDS HGLSIGGANS GSRAQFSNEF YFAGADYKAT KDLLLQYYYG NLRDFYKQHF
FGLVHDWKLP VGSLKTDLRY FYSDSDGKNE SASGRAEGYV SSGADGSSGE VDNNLWSAMF
TYSLAGHALS LGYQKVSGDS DFPHINLGSG RTLHLITNGQ IGKFASAGEN TWVAGYAYDF
AAIGVPGLKT KLIYFSGDDI DAAGSDNKEW ERNFRIDYAV QSGPLKGVGL AWLNAATRGN
DGRDLDENRL MLTYSLPLL