Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_31180 |
Symbol | |
ID | 7762018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3222480 |
End bp | 3223799 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643805993 |
Product | OprE-like outer membrane porin |
Protein accession | YP_002800257 |
Protein GI | 226945184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC GCCGGCGCGG CGGTTTGACG CTTTCCTGCC TGGGCCTTTT GCCCTTCGGC CAGGCCGGTG CCGCCGGCTT CATCGAGGAC AGCAAGGCCA CGCTGAGCCT CAAGAACTTC TACATCAACC AGGACGTCCG CAACCAGGAC GCGCCGCGCT CCGAGGAGTG GGGCCAGGCG TTCTTCCTCG ACTACAAGTC CGGCTTCACC GAGGGTCCGG TCGGCTTCGG CCTCGACGTG CTGGCCATGC ACGCCATCCG CCTCGACGGC GGCGGCCGCT CCGGCAAGGC GGACATCGAA CGCACCCCGG GCGGCATGTT CCCGCTGGAA AGCAACGGCA AGGGCAAGAC CGACTTCGGC CGCGTTGGCG TGACCGGCAA ACTGCGCTTC TCCAAGACCG AGGCGCGCCT CGGCACCCTG CTGCCGAAGA TGCCGGTGCT GGTCTACAAC GACGGCCGCC TGCTGCCGCA ACTGTTCCAT GGCGCGCAGA TCACTTCCAA CGAGATCGAC AACCTGAGCC TGACCGCCGG CAAGATCGAA CACTCGACCG AGCGTAACTC CGGCGACAGC CACGGCCTGT CCATCGGCGG CGCCAACAGC GGCAGCAGGG CGCAGTTCAG CAACGAGTTC TACTTCGCCG GCGCCGACTA CAAGGCCACC AAGGACCTCC TGCTGCAGTA CTACTACGGC AACCTGCGCG ACTTCTACAA ACAGCACTTC TTCGGCCTGG TGCACGACTG GAAGCTGCCG GTGGGTTCGC TGAAGACCGA CCTGCGCTAC TTCTACAGCG ACTCCGACGG CAAGAACGAG AGCGCCTCCG GACGTGCCGA GGGCTATGTC AGCAGCGGCG CCGACGGCAG CAGCGGCGAG GTCGACAACA ACCTGTGGAG TGCGATGTTC ACCTACAGCC TGGCCGGTCA CGCGCTGAGC CTCGGCTACC AGAAGGTCAG TGGCGACAGC GACTTCCCGC ACATCAACCT GGGGAGCGGG CGCACCCTGC ATCTGATCAC CAACGGCCAG ATCGGCAAGT TCGCCAGCGC CGGCGAGAAC ACCTGGGTGG CCGGCTACGC CTACGACTTC GCGGCGATCG GCGTGCCGGG GTTGAAGACC AAGCTGATCT ACTTCAGCGG CGACGACATC GACGCCGCCG GCAGCGACAA CAAGGAGTGG GAACGCAACT TCCGCATCGA CTACGCGGTG CAGAGCGGCC CGCTCAAGGG CGTCGGCCTC GCCTGGCTCA ATGCCGCGAC CCGTGGCAAC GATGGCCGCG ACCTGGACGA GAATCGCCTG ATGCTCACCT ACAGTCTGCC GTTGCTTTGA
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Protein sequence | MSERRRGGLT LSCLGLLPFG QAGAAGFIED SKATLSLKNF YINQDVRNQD APRSEEWGQA FFLDYKSGFT EGPVGFGLDV LAMHAIRLDG GGRSGKADIE RTPGGMFPLE SNGKGKTDFG RVGVTGKLRF SKTEARLGTL LPKMPVLVYN DGRLLPQLFH GAQITSNEID NLSLTAGKIE HSTERNSGDS HGLSIGGANS GSRAQFSNEF YFAGADYKAT KDLLLQYYYG NLRDFYKQHF FGLVHDWKLP VGSLKTDLRY FYSDSDGKNE SASGRAEGYV SSGADGSSGE VDNNLWSAMF TYSLAGHALS LGYQKVSGDS DFPHINLGSG RTLHLITNGQ IGKFASAGEN TWVAGYAYDF AAIGVPGLKT KLIYFSGDDI DAAGSDNKEW ERNFRIDYAV QSGPLKGVGL AWLNAATRGN DGRDLDENRL MLTYSLPLL
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