Gene Avin_30920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30920 
Symbol 
ID7761992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3197999 
End bp3199030 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID643805967 
ProductABC transporter, periplasmic binding protein 
Protein accessionYP_002800231 
Protein GI226945158 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCCAG GCAAACGCAT TCCCGCGATT CGCCGTCTGG CCGGCGCCAT CGCTCTGGGG 
CTCGGTCTCG CCGGCAGTCT GCTGACCCCG GCGGCGGCCC ACGCCGAAGG CCAGGTCCGC
ATCGCCGAAC AGTTCGGTAT CGTCTATCTG CTGCTCAACG TGGTGCGCGA CCAGCAACTG
ATCGAGAAAC ACGGCAAGGA GCAGGGCCTC GACATCAAGG TCGACTGGAC CCAACTGTCC
GGCGGGGCGG CGGTCAACGA CGCGCTGTTG GCCGGGACCA TCGACATCGC CGGGGCCGGC
ATCGGCCCGC TGTTGACCGT CTGGGACCGC ACCCACGGCC GGCAGAACGT CAAGGGCGTG
GCCTCGCTGG GCAACTTCCC GTACTACCTG CTGAGCAACA ACCCCAAGGT CAAGACCATC
GCCGACTTCG GCGACAAGGA CCGCATCGCC GTGCCGGCGG TGGGCGTCTC CATCCAGTCG
CGCTTTTTGC AGTACGCCGC CGCCAAGCAG TGGGGCGACA AGTATTACAA CCGGCTGGAC
AAGTACACGG TCGCGCTGCC GCACCCGGAG GCCACCTCGG CCCTGACCAG CGGCAGCACC
GAGCTGACCG GGCACTTCTC CAACCCGCCG TTCCAGAACC AGGCGCTGGA AAGCCCCAAC
GTGCACGTGG TGCTCGACAC CTACGAGCTG CTCGGGCCGA ACTCGCCGAC CGTGCTGTAC
GCCACCGAGA AATTCCGCAA GGAAAATCCG AAGACCTACC GGGCCTTCGT CGACGCGCTG
GCCGAGGCGG CCGATTTCGC GCAGAAGGAC AAAGGCGCCG CGGCGGAGAC CTACATCCGC
GTGACCGGGG CGAAGATCGG CAAGGACGCG CTGCTGAAGA TCATCGACAA CGACAAGTTC
GAGTTCAGCG TGACGCCGAA GAACACCTAT CCGCTGGCCG AGTTCCTGCA CCGGGTCGGC
GCGCTGAAGA ACAAGCCGGC CTCCTGGCAG GACTACTTCT TCCCCGATCC CAGGCTGGCC
GAGGGGAGTT GA
 
Protein sequence
MFPGKRIPAI RRLAGAIALG LGLAGSLLTP AAAHAEGQVR IAEQFGIVYL LLNVVRDQQL 
IEKHGKEQGL DIKVDWTQLS GGAAVNDALL AGTIDIAGAG IGPLLTVWDR THGRQNVKGV
ASLGNFPYYL LSNNPKVKTI ADFGDKDRIA VPAVGVSIQS RFLQYAAAKQ WGDKYYNRLD
KYTVALPHPE ATSALTSGST ELTGHFSNPP FQNQALESPN VHVVLDTYEL LGPNSPTVLY
ATEKFRKENP KTYRAFVDAL AEAADFAQKD KGAAAETYIR VTGAKIGKDA LLKIIDNDKF
EFSVTPKNTY PLAEFLHRVG ALKNKPASWQ DYFFPDPRLA EGS