| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_30620 |
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| Symbol | lapC |
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| ID | 7761962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3169742 |
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| End bp | 3171202 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643805938 |
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| Product | 2-hydroxymuconic semialdehyde dehydrogenase; LapC |
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| Protein accession | YP_002800202 |
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| Protein GI | 226945129 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03216] 2-hydroxymuconic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.141179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAGA TCGAGAACTT CATTGCCGGC GAGTACGTCG CCGCCGCCAG CGGCAGGCGT
TTCGACAAGC GTTCGCCGCT CGACAACCGG GTGATCGCCT CGATCGCCGA GGCCGGGCGC
GCCGAGGTGG ATGCGGCGGT CGGGGCCGCG CGCGGCGCGC TCGCCGGCGA CTGGGGCAGG
CTGAGTACCG AACAGCGCGT CGAGCTGCTG TACGGCGTGG CCAACGAGAT CACCCGCCGC
TTCGATGATT TCGTCGAGGC GGAGATGGCC GACACCGGCC AGCCGGCGCA CGTGATGAAG
CAGGTGTTCA TCCCGCGCGG CGCGGCCAAC TTCAAGGTGT TCGCCGACGT GGTGAAGAAC
GTCGCCAGCG AATCCTTCCA GACGGCCACC CCGGACGGGC GCGGCGCGCT CAATTACGCG
CTGCGCGTGC CCAAGGGGGT GATCGGGGTG ATCTGCCCGT GGAACGCGCC CTTCATGCTG
ATGACCTGGA AGGTCGGCCC GGCGCTGGCC TGCGGCAACG CGGTGGTGGT CAAGCCGTCC
GAGGAGTCGC CGCAGACCGC CGCGCTGCTC GGCGAGGTGA TGAACGCGGT GGGCATTCCC
AAGGGCGTCT ACAACGTGGT GCAGGGGTTC GGCCCGGATT CGGCGGGCGA ATTCGTCACC
CAGCACCCGG GCGTCGACGC CATCACCTTC ACCGGCGAAA CGCGCACCGG CGCGGCGATC
ATGAAGGCCG CCTCGGAAGG CATGCGCGAC GTATCCTTCG AGCTGGGCGG CAAGAACGCC
GGCATCGTCT TCGCCGATTG CGACTTCGAG GCGGCGGTGG AGGGCATCTT CCGCTCCGCT
TTCCTCAATT CCGGGCAGGT GTGCCTGGGC ACCGAACGGG TGTACGTCGA GCGGCCGATC
TTCGAGCGCT TCGTGCAGGC GCTCAAGGTC AAAGCGGAAA GCGTCCGCTT CGGCCGCCCG
GACGATCACG ACGCCAATTA TGGTCCGCTG ATCAGCCAGG AGCACCGCCA GAAGGTGCTG
TCCTACTACC GCAAGGCGCT GGAAGAGGGC GCCACGCTGG TCACCGGCGG CGGCGTGCCG
GAGATGCCGG GCGAACTGGC CGAGGGCGCC TGGGTGCAGC CGACCATCTG GACCGGCCTG
CCGGAAAGCG CCGCGGTGGT GCGCGAGGAG ATCTTCGGAC CCTGCTGCCA CATCCGCCCG
TTCGACGCCG AGGACGAGGT GGTGCAACTC GCCAACGCCA CCGACTACGG CCTGTCCACC
ACGCTCTGGA CCAACGACCT GGCCCGCGCC CACCGCCTGG CGGCGCGCGT CGAGGTGGGC
ATCACCTGGA TCAACAGTTG GTTCCTGCGC GACCTGCGCA CCGCCTTCGG CGGCGCCAAG
CAGTCCGGCA TCGGCCGCGA GGGCGGCGTG CATTCGCTGG AGTTCTACAC CGAGACGCGC
AACGTCTGCG TGAAGCTCTG A
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| Protein sequence | MRKIENFIAG EYVAAASGRR FDKRSPLDNR VIASIAEAGR AEVDAAVGAA RGALAGDWGR
LSTEQRVELL YGVANEITRR FDDFVEAEMA DTGQPAHVMK QVFIPRGAAN FKVFADVVKN
VASESFQTAT PDGRGALNYA LRVPKGVIGV ICPWNAPFML MTWKVGPALA CGNAVVVKPS
EESPQTAALL GEVMNAVGIP KGVYNVVQGF GPDSAGEFVT QHPGVDAITF TGETRTGAAI
MKAASEGMRD VSFELGGKNA GIVFADCDFE AAVEGIFRSA FLNSGQVCLG TERVYVERPI
FERFVQALKV KAESVRFGRP DDHDANYGPL ISQEHRQKVL SYYRKALEEG ATLVTGGGVP
EMPGELAEGA WVQPTIWTGL PESAAVVREE IFGPCCHIRP FDAEDEVVQL ANATDYGLST
TLWTNDLARA HRLAARVEVG ITWINSWFLR DLRTAFGGAK QSGIGREGGV HSLEFYTETR
NVCVKL
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