| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_30470 |
|---|
| Symbol | sodA |
|---|
| ID | 7761947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3156657 |
|---|
| End bp | 3157199 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643805919 |
|---|
| Product | CU-Zn Superoxide dismutase |
|---|
| Protein accession | YP_002800187 |
|---|
| Protein GI | 226945114 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2032] Cu/Zn superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACA AGGAGATGCC CATGAAAAAA CGGCTGATTG CAGCAATGAT CGCCAGTTGC
GCACTACCCC TGCAGGCCGC GCCGCTCAGC GTCGCCCTCA ACGCGGTGGG CGCCGACGGC
ATAGGCGCAG CGCTCGGCAC CGTCAGCATC GAGCAGAGCG AATACGGCCT GGTCTTCACC
CCCAACCTCT CCGGCCTGCA GCCCGGCATC CATGGCTTCC ACATTCATGC CTCGGGCGAC
TGCGGCACCA CGGAGAAGGA AGGCCAGAAG GTCGCCGCAG GCGCCGCAGG CGGCCACTGG
GACCCGCAGA ACGCCACCAG GCACGGCCAG CCCTGGGGAG AAGGCCATCT GGGCGATCTG
CCGGCCCTCT ACGTGGACGC CAACGGCAAG GCCACGCAGC CGGTACTGGC CCCGCGACTG
AAGGACCTGG AAGCGATCAA GGGACGAGCC CTGATGGTGC ATGCCGGCGG CGACAATCAT
GCCGACAGCC CTGCCCCGCT GGGCGGTGGC GGAGCCCGGG TGGCCTGCGG AGTCATCAAG
TAA
|
|---|
| Protein sequence | MYNKEMPMKK RLIAAMIASC ALPLQAAPLS VALNAVGADG IGAALGTVSI EQSEYGLVFT
PNLSGLQPGI HGFHIHASGD CGTTEKEGQK VAAGAAGGHW DPQNATRHGQ PWGEGHLGDL
PALYVDANGK ATQPVLAPRL KDLEAIKGRA LMVHAGGDNH ADSPAPLGGG GARVACGVIK
|
|---|
| |