Gene Avin_30410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30410 
SymbolccmE 
ID7761941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3152723 
End bp3153190 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID643805913 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_002800181 
Protein GI226945108 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTG TGCGCAAGAG GCGGCTGTTC ATCGTGCTGG CGATCCTCGC CGGCGTGGGC 
GCCGCCGTGG CACTGGCCCT GTCCGCCCTG CAGCAGAACA TCAACCTGTT CTACACCCCC
AGCCAGATCG CCGCGGGCGA GGCGCCCGAA GGTGCGCGGA TTCGCGCCGG CGGGCTGGTC
GAGAAGGGCT CGCTGCAACG CGACGCGACT TCGCTGGCGG CGACCTTCCG GGTCACCGAC
GGCGTGGCGA CGGTGACCGT CCGTTACCAG GGCATCCTCC CCGACCTGTT CCGCGAGGGG
CAGGGGATAG TCGCGCTGGG CCGGGTCGAC GCCGGAGGCA TGCTGCAGGC CGACGAGGTG
CTGGCCAAGC ACGACGAGAA CTACATGCCG CCGGAGGTCA GCCAGGCGCT GGAGAAGAGC
GGCATGCTCA AGCACTACGA GAACGGCAAG CCGGGAGGCG CGCAATGA
 
Protein sequence
MNPVRKRRLF IVLAILAGVG AAVALALSAL QQNINLFYTP SQIAAGEAPE GARIRAGGLV 
EKGSLQRDAT SLAATFRVTD GVATVTVRYQ GILPDLFREG QGIVALGRVD AGGMLQADEV
LAKHDENYMP PEVSQALEKS GMLKHYENGK PGGAQ