Gene Avin_30240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30240 
Symbol 
ID7761924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3132122 
End bp3132898 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID643805896 
ProductIclR family regulatory protein 
Protein accessionYP_002800164 
Protein GI226945091 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCA GTCAAATCGA ACGAGCGCTG AGTCTTCTGG AAAGCCTGAC CGCCGACCCC 
GGCGGGATTC CCCTGCAGAG CCTGGCCGAT CAGTTGCGCA TCCCCAAGAG CGCCACGCAT
CGCATGCTCG CCGACCTGAT CCGCCTCGGC TACGTGCGCC AGGACCCGCA CACCAGCCGT
TACCGGTTGT CCACCAAGCT GGTGGCGCTG GGCTTTCGCT ACCTGGCCAA CAGCGGCGCG
GACGTGGTCC AGCCGATCCT CGACCGTCTG GCCGAGGAAA CCGGCGAACT GGTGCGGCTG
GGCGTGATCG ACGGCGAGCG CCTGACCTGG ATCGCCAAGT CCCAGGGCGC TCGCGGCGGG
TTGCGCTACG ACCCGGACAT GGGCCGCGAT GCACCGCTGT CTTCCACCGC TTCCGGGCAT
GCCTGGCTGG CCAGCATGAG CGACGAGGAG GCCCTGCTCC GGGTCGATCG GCAGACGCCG
GTCGAGCCGG GCGAACTGGG TCCCAACGCT CCGCGCGACA GCGTCGAGTT GCTCGAACGA
TTGCGCCTGG CCCGCGAGCA CGGTTACGCC TGGGTGGTGG AAAGTTCGGC CGTCGGTACC
GCGGCCATGG CCGCCGTGGT CCGCGATCCG CGCAGCCGCC GGCCCATCGG TGTGCTCAGC
CTCGCCGGTC CCAGCGCGCG TCTCGGCGAG GCGCGCATGC ACCAGTTGGC GCCGCTGCTG
CTGGCGGCCG GTGAAGAGCT GTCCGAGGCC AGCCAGGCTT CCGAGCTGTT CCCCTGA
 
Protein sequence
MAGSQIERAL SLLESLTADP GGIPLQSLAD QLRIPKSATH RMLADLIRLG YVRQDPHTSR 
YRLSTKLVAL GFRYLANSGA DVVQPILDRL AEETGELVRL GVIDGERLTW IAKSQGARGG
LRYDPDMGRD APLSSTASGH AWLASMSDEE ALLRVDRQTP VEPGELGPNA PRDSVELLER
LRLAREHGYA WVVESSAVGT AAMAAVVRDP RSRRPIGVLS LAGPSARLGE ARMHQLAPLL
LAAGEELSEA SQASELFP