Gene Avin_30130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_30130 
Symbol 
ID7761913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3121799 
End bp3122938 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content68% 
IMG OID643805885 
ProductPolysaccharide export protein 
Protein accessionYP_002800153 
Protein GI226945080 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGAT TCGCCTTGTC CGTCCCGCAC AGCGGCAGCG CGGCAGCGCG CCGTACACGC 
ATCCTCGCTC TGGTAGCCGC CCTCCTCCAG GGCTGCATGT TCTCCCCCGG CCCCTACCTC
GACACCTCCG AACTCCGCGG CAAGGGCCCG CCGGAAAGCC CGCGCTTCGA GCTGGTGCCC
ATCACCACCC GACTGGTGGC GACCCAGGAA GCCACCCGCG TCGTCGAGAA ACTGCCGCCC
GAGCTGACCG GCTACACCCC CGGCCCCTAT CTGATCGGCG TCGGCGACGT GCTCAATATC
ACCGTCTGGG ATCATCCGGA ACTGACCAAC CCGGCCGGCG TGCAGCAGTC GTCCGAAGCC
AGCGGCCGCC CAGTGCGCCC CGACGGCCGC CTGTTCTACC CCTATATCGG CGAGATCCAG
GCCGCCGGCC TGACCATCGA GCAATTGCGC AACGACATCG CCGGGCGCCT GGCCCGCTAT
ATCGAGAATC CGCAGGTGGA TGTCGGCGTG AACCGTTTCG GCGGCCGCCG GGTGATTCTC
ACCGGAGCCT TCGGCAAGAC CGGCCCGCAA CCCCTGACCA CCATCCCCCT GTCGCTGCCG
GAAGCCATCG GCCAGGCCGG CGTGGCCGCG GGAGCCGACA TCGCCAGGCT GATCCTCAAG
CGCAACGGCC GGGAATACCG TCTCGACCTC GACACCCTGA ACCGCGGCGG CGCGGAACTC
GACCGCATCT ACCTGAAGGA CGGCGACCAG TTGCACCTGC CCAGCAACGA CAGCCGGCGG
ATCTTCGTCC TGGGCGAGGT CATCTCGCCC GGCCCGCTGT CCTTCAGAAG CCGCAGCATG
ACCCTGACCG AAGTGATCGG CCTGGTCAGG GGCCTGCGCC AGGAAACCTC CGATCCGCAG
GCCGTCTACG TGATACGCGG GGTGGGCGAT CTCGAACGGG AAACCGCCCA AGTCTTCCAG
TTGGACGCCG AGTCGCCGGC CGCCCTGGTG CTGGCCGCGC ATTTCCACGT CGAGCCCCAG
GACGTGGTGT ACGTCGGCGC CGCCGGCATC ACCCGCTGGA ACCGCTTCAT CAGCCAGTTG
CTGCCTTCGG GTACCTTCCT CAGGACAGGC ATCAATCTGG AGGACGACCT GAACCGATAG
 
Protein sequence
MEGFALSVPH SGSAAARRTR ILALVAALLQ GCMFSPGPYL DTSELRGKGP PESPRFELVP 
ITTRLVATQE ATRVVEKLPP ELTGYTPGPY LIGVGDVLNI TVWDHPELTN PAGVQQSSEA
SGRPVRPDGR LFYPYIGEIQ AAGLTIEQLR NDIAGRLARY IENPQVDVGV NRFGGRRVIL
TGAFGKTGPQ PLTTIPLSLP EAIGQAGVAA GADIARLILK RNGREYRLDL DTLNRGGAEL
DRIYLKDGDQ LHLPSNDSRR IFVLGEVISP GPLSFRSRSM TLTEVIGLVR GLRQETSDPQ
AVYVIRGVGD LERETAQVFQ LDAESPAALV LAAHFHVEPQ DVVYVGAAGI TRWNRFISQL
LPSGTFLRTG INLEDDLNR