| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_30000 |
|---|
| Symbol | |
|---|
| ID | 7761901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3106146 |
|---|
| End bp | 3107258 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643805873 |
|---|
| Product | Glycosyl transferase, group 1 family protein |
|---|
| Protein accession | YP_002800141 |
|---|
| Protein GI | 226945068 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGCACTGTC TTGAGACCAT CGGCTCCGGC GGCGTCGAAC AGCGCCGCCT GACCCTGGCC
CGCCGGCTCG ACGGCTCGCG CTACCAGCAG TCGCTGGTCT GCACCAAGGC CGTGGGCGCC
CTGCCGGCGC GCTTCGCCGA GGCCGGCTGT CCGCTGCACG CGGTCGGGGT GTTCCGCGGC
GTGCTGGACC GCGAGCCGTA CCGGCGGGCC CTGCGCGTGG TGCGCGAGTA CCGTCCGCAC
ATCATCCACG GCGCGGTGTT CGAGGGCGTG TCCATGGCCA CGATTCTCGG ACGGCTCTCC
GGGGTGCCGG TGATCATCGG CGAAGAAACC TCCGACCCGG TCGGCCGCCA CTGGCGCGCT
CACTTGCTCT TCCGTCTGCT CGGCACGCTG AGCCACCAGA TGGTGGCGGT GTCCCCCGCC
GTCGAGCGCT ACCTGCTCGA GCGCCTGCAC CTGCCGCGCA GCAAGGTCAC CCTGATCAAC
AACGGCGTGG CCGAGCCGGC GCCGCCCGAC GAGCGGCAGG TGAACGCGCT GCGCGAGCGC
TTCGGGCTGG CCCCGGAGCA CTTCGTGATC GGCACCGTCG GCCGGCTGCT GGACCGCCAC
AAGCGCGTCA GCGACCTGCT CCGCGCGCTG GCCGCGCTGC TTCCGGCCTG CCCGGAGGCG
CGCCTGCTGA TCGTCGGTCG CGGGCCGGAC GAAGGCATGC TGCGCGAACT GGCCGGCCGC
CTCGGGGTCG CCGCCCAGGT GCGCTTCGCC GGCTACCAGG CCGATCCGCA GCCTTGCTAC
GCGCTCATGG ACGTCTTCGC CCTGGCTTCG GCCATGGAGG CCTTCGGCCT GGTGCTGGTC
GAGGCGATGC AGGCCGGCCT GCCGGTGGTG GCGACCCGGG TGGGCGGCAT CCCCGACGTG
GTCGACGAGG GCAAGAGCGG CCTGCTGGTG CCGCCCGCCC GGCCGCAGGC GCTCGCCGAA
GCCATCCTGG AGCTGCGCCG CGACCCGCTC CGGCGCCGGG CCATGGGCCG GGTCGGACAG
CTCCTGGCCA GCACCAACTT CGGCGCGGAA CGCTACGTCC GCGAAGTCGA CTGGCTCTAC
CGGCGTCTCG CCGCGCAGCG CATCGCCTCA TGA
|
|---|
| Protein sequence | MHCLETIGSG GVEQRRLTLA RRLDGSRYQQ SLVCTKAVGA LPARFAEAGC PLHAVGVFRG
VLDREPYRRA LRVVREYRPH IIHGAVFEGV SMATILGRLS GVPVIIGEET SDPVGRHWRA
HLLFRLLGTL SHQMVAVSPA VERYLLERLH LPRSKVTLIN NGVAEPAPPD ERQVNALRER
FGLAPEHFVI GTVGRLLDRH KRVSDLLRAL AALLPACPEA RLLIVGRGPD EGMLRELAGR
LGVAAQVRFA GYQADPQPCY ALMDVFALAS AMEAFGLVLV EAMQAGLPVV ATRVGGIPDV
VDEGKSGLLV PPARPQALAE AILELRRDPL RRRAMGRVGQ LLASTNFGAE RYVREVDWLY
RRLAAQRIAS
|
|---|
| |