Gene Avin_29980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29980 
Symbol 
ID7761899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3104049 
End bp3105026 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID643805871 
ProductGlycosyl transferase, family 2 protein 
Protein accessionYP_002800139 
Protein GI226945066 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.191299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCT CCATCGCCAT GGCCACCTAC AATGGCGGCC GCTACCTCCG GGAACAACTG 
GACAGCTTCG TCCGCCAGAC CCGCCGGCCC GACGAACTGG TGGTCTGCGA CGACGGCTCG
ACCGACGCGA CCCTCGACAT CCTGGAGAAC TTCCAGCGAC AGGCGCCCTT TCCCGTGCGC
CTCCAGCGCA ACCAGAGAAA CCTGGGCTAC GTCAGGAACT TCGAGAAGGC GCTGTCCCTG
TGCCGGGGCG ACCTCCTGTT CCTCAGCGAC CAGGACGACG TCTGGTTCGA CGAGCGGCTG
GAGATCGTCG AGCAGGCGTT CCTCGCCCAT CCCGAAAAGA TGGTCGTGCT CAACGACCAG
ATAATCACCA CGGAGAACCT GGAGCCCACC GGCCGCAGCA AACTGGGCAA CACCCGCGCC
CTGGGCTTCG CCGACACCTA TTTCATCACC GGCTGCTGCA CGGCGATCCG CAGCGCCTGG
CTCGGGATCG CCCTGCCGAT TCCCGAGGTG GTCGGCCATC ACCACATCCC GCACGACATC
TGGATCAACA AGCTCGCCGA CTTCCTCGAC CTGCGCCTGA TCGTCGAGCG TCCGCTGCAG
TTCTACCGCC GGCACGGCAA CAACGCCTCG CACAGCGTCT CCAGCGCCAC CGGCCGGCCG
TCCCGGCTGC GGGTGCTGGC CAGCCATGGC CTGCAGGACG CCCGCGAGGG CTGGGCGACC
CAGATCGTCC ACGCGAACCT GTACCTCGAA CGGCTCGAAA CGAGCCGGGC GCGCCTCGCG
GCGCTGGGCG CCGACCGGCG CCTGGAACCG GCGCTGGCCC GCCTGCGGGC CAGGATTCCG
GCGTTCGAAC GACGCCTGGC GATCGTCGCG CGCCCGCGCT GGCGCCGTTC CCCGGAACTG
CTGCGCTTCT GGCTGGCGGG CGGCTACCGG ACCTTCGCCG GCTGGAAAAG CGCGCTCAAG
GACATGGTCC GGCCATGA
 
Protein sequence
MNISIAMATY NGGRYLREQL DSFVRQTRRP DELVVCDDGS TDATLDILEN FQRQAPFPVR 
LQRNQRNLGY VRNFEKALSL CRGDLLFLSD QDDVWFDERL EIVEQAFLAH PEKMVVLNDQ
IITTENLEPT GRSKLGNTRA LGFADTYFIT GCCTAIRSAW LGIALPIPEV VGHHHIPHDI
WINKLADFLD LRLIVERPLQ FYRRHGNNAS HSVSSATGRP SRLRVLASHG LQDAREGWAT
QIVHANLYLE RLETSRARLA ALGADRRLEP ALARLRARIP AFERRLAIVA RPRWRRSPEL
LRFWLAGGYR TFAGWKSALK DMVRP