Gene Avin_29890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29890 
Symbol 
ID7761890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3091958 
End bp3092404 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content64% 
IMG OID643805862 
ProductLow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_002800130 
Protein GI226945057 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0626343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAAC GGATATTGAT CGTCTGCATC GGCAACATAT GTCGAAGTCC CAGTGCCCAG 
GCATTGATGA GCGAAGCGCT ATCCCACGAC AAGCGAACCG TGAGAATCGA TTCCGCCGGT
CTGGCGGCAC GGGTCGGCCT GCCGATGGAA CCCACCGCCC GCGCGGTACT GCTCGAACAC
CGGCACCGTC CACCCACACA CCGGGCCTGC CAACTGGAGC GCAGCATGCT GCAACAGGCC
GATCTGGTGC TGGTCATGGA GCGCCAACAC CTCGACAGCA TCTACCGGAT CGCCCCCGAG
GCGCGCGGCA AGACCTTCCT GCTGGGCAAA TGGCAGGACG AAGCGGAAAT CCAGGACCCC
TTCCGCCGGG ATCGGACGGC CTTCGAACAG GCCTACCGAC AGATTCGCAC GGCCGTCGAG
GCATGGACCG TGCGCCTGAG CCATTGA
 
Protein sequence
MLERILIVCI GNICRSPSAQ ALMSEALSHD KRTVRIDSAG LAARVGLPME PTARAVLLEH 
RHRPPTHRAC QLERSMLQQA DLVLVMERQH LDSIYRIAPE ARGKTFLLGK WQDEAEIQDP
FRRDRTAFEQ AYRQIRTAVE AWTVRLSH