Gene Avin_29750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29750 
SymbollpdA 
ID7761876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3075490 
End bp3076923 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content65% 
IMG OID643805848 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_002800116 
Protein GI226945043 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.913625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA AGTTCGACGT GATTGTGATT GGTGCAGGCC CCGGCGGCTA CGTGGCTGCC 
ATCAAGTCTG CCCAGCTTGG CCTCAAGACC GCCCTGATCG AGAAGTACAA GGGCAAGGAA
GGCAAGACCG CGCTTGGCGG TACCTGCCTG AACGTGGGCT GCATTCCCTC CAAGGCGCTG
CTGGACAGCT CCTACAAGTT CCACGAGGCA CACGAGAGCT TCAAGCTCCA CGGCATCAGC
ACCGGCGAAG TCGCCATCGA CGTGCCGACC ATGATCGCCC GCAAGGACCA GATCGTCAGA
AACCTCACCG GCGGGGTCGC CTCGCTGATC AAGGCCAATG GCGTCACCCT GTTCGAAGGT
CATGGCAAGC TGCTGGCCGG CAAGAAGGTC GAAGTCACCG CTGCCGACGG CAGCAGCCAG
GTACTCGACA CCGAGAACGT CATCCTCGCT TCCGGTTCCA AGCCGGTGGA AATTCCGCCG
GCTCCGGTCG ATCAGGATGT CATCGTCGAC TCCACCGGCG CCCTGGACTT CCAGAACGTT
CCGGGCAAAC TCGGCGTGAT CGGCGCCGGC GTGATCGGCC TGGAGCTGGG TTCGGTCTGG
GCTCGCCTGG GTGCCGAGGT CACCGTGCTC GAGGCCATGG ACAAGTTCCT GCCGGCCGTC
GATGAACAGG TCGCCAAGGA AGCCCAGAAG ATTCTCACCA AGCAAGGCCT GAAGATCCTG
CTGGGTGCCC GCGTCACCGG CACCGAGGTC AAGAACAAGC AGGTCACCGT CAAGTTCGTC
GATGCCGAAG GCGAGAAGTC GCAGGCCTTC GACAAGCTGA TCGTCGCGGT CGGCCGCCGC
CCGGTGACTA CCGACCTGCT GGCCGCCGAC AGCGGCGTGA CCCTGGACGA GCGTGGCTTC
ATCTATGTCG ACGACTACTG CGCCACCAGC GTGCCGGGCG TCTATGCCAT CGGTGACGTG
GTCCGCGGTG CCATGCTGGC CCACAAGGCC TCGGAAGAAG GTGTGGTGGT CGCCGAGCGC
ATCGCCGGTC ACAAGGCCCA GATGAACTAT GACCTGATCC CGGCCGTCAT CTACACCCAC
CCGGAAATCG CCGGCGTGGG CAAGACCGAG CAGGCTCTGA AGGCCGAAGG CGTGGCCATC
AACGTCGGCG TCTTCCCCTT CGCTGCCAGC GGCCGCGCCA TGGCCGCCAA CGATACCGCA
GGCTTCGTCA AGGTCATCGC CGATGCCAAG ACCGACCGCG TGCTGGGCGT CCATGTGATC
GGCCCGAGCG CCGCCGAACT GGTCCAGCAG GGCGCTATCG CCATGGAGTT CGGCACCAGC
GCCGAAGACC TGGGCATGAT GGTTTTTGCC CACCCGGCGC TGTCCGAAGC GCTGCACGAG
GCCGCCCTGG CGGTCAGCGG CCACGCGATT CACGTTGCCA ACCGCAAGAA GTAA
 
Protein sequence
MSQKFDVIVI GAGPGGYVAA IKSAQLGLKT ALIEKYKGKE GKTALGGTCL NVGCIPSKAL 
LDSSYKFHEA HESFKLHGIS TGEVAIDVPT MIARKDQIVR NLTGGVASLI KANGVTLFEG
HGKLLAGKKV EVTAADGSSQ VLDTENVILA SGSKPVEIPP APVDQDVIVD STGALDFQNV
PGKLGVIGAG VIGLELGSVW ARLGAEVTVL EAMDKFLPAV DEQVAKEAQK ILTKQGLKIL
LGARVTGTEV KNKQVTVKFV DAEGEKSQAF DKLIVAVGRR PVTTDLLAAD SGVTLDERGF
IYVDDYCATS VPGVYAIGDV VRGAMLAHKA SEEGVVVAER IAGHKAQMNY DLIPAVIYTH
PEIAGVGKTE QALKAEGVAI NVGVFPFAAS GRAMAANDTA GFVKVIADAK TDRVLGVHVI
GPSAAELVQQ GAIAMEFGTS AEDLGMMVFA HPALSEALHE AALAVSGHAI HVANRKK