Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_29750 |
Symbol | lpdA |
ID | 7761876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3075490 |
End bp | 3076923 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643805848 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_002800116 |
Protein GI | 226945043 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.913625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA AGTTCGACGT GATTGTGATT GGTGCAGGCC CCGGCGGCTA CGTGGCTGCC ATCAAGTCTG CCCAGCTTGG CCTCAAGACC GCCCTGATCG AGAAGTACAA GGGCAAGGAA GGCAAGACCG CGCTTGGCGG TACCTGCCTG AACGTGGGCT GCATTCCCTC CAAGGCGCTG CTGGACAGCT CCTACAAGTT CCACGAGGCA CACGAGAGCT TCAAGCTCCA CGGCATCAGC ACCGGCGAAG TCGCCATCGA CGTGCCGACC ATGATCGCCC GCAAGGACCA GATCGTCAGA AACCTCACCG GCGGGGTCGC CTCGCTGATC AAGGCCAATG GCGTCACCCT GTTCGAAGGT CATGGCAAGC TGCTGGCCGG CAAGAAGGTC GAAGTCACCG CTGCCGACGG CAGCAGCCAG GTACTCGACA CCGAGAACGT CATCCTCGCT TCCGGTTCCA AGCCGGTGGA AATTCCGCCG GCTCCGGTCG ATCAGGATGT CATCGTCGAC TCCACCGGCG CCCTGGACTT CCAGAACGTT CCGGGCAAAC TCGGCGTGAT CGGCGCCGGC GTGATCGGCC TGGAGCTGGG TTCGGTCTGG GCTCGCCTGG GTGCCGAGGT CACCGTGCTC GAGGCCATGG ACAAGTTCCT GCCGGCCGTC GATGAACAGG TCGCCAAGGA AGCCCAGAAG ATTCTCACCA AGCAAGGCCT GAAGATCCTG CTGGGTGCCC GCGTCACCGG CACCGAGGTC AAGAACAAGC AGGTCACCGT CAAGTTCGTC GATGCCGAAG GCGAGAAGTC GCAGGCCTTC GACAAGCTGA TCGTCGCGGT CGGCCGCCGC CCGGTGACTA CCGACCTGCT GGCCGCCGAC AGCGGCGTGA CCCTGGACGA GCGTGGCTTC ATCTATGTCG ACGACTACTG CGCCACCAGC GTGCCGGGCG TCTATGCCAT CGGTGACGTG GTCCGCGGTG CCATGCTGGC CCACAAGGCC TCGGAAGAAG GTGTGGTGGT CGCCGAGCGC ATCGCCGGTC ACAAGGCCCA GATGAACTAT GACCTGATCC CGGCCGTCAT CTACACCCAC CCGGAAATCG CCGGCGTGGG CAAGACCGAG CAGGCTCTGA AGGCCGAAGG CGTGGCCATC AACGTCGGCG TCTTCCCCTT CGCTGCCAGC GGCCGCGCCA TGGCCGCCAA CGATACCGCA GGCTTCGTCA AGGTCATCGC CGATGCCAAG ACCGACCGCG TGCTGGGCGT CCATGTGATC GGCCCGAGCG CCGCCGAACT GGTCCAGCAG GGCGCTATCG CCATGGAGTT CGGCACCAGC GCCGAAGACC TGGGCATGAT GGTTTTTGCC CACCCGGCGC TGTCCGAAGC GCTGCACGAG GCCGCCCTGG CGGTCAGCGG CCACGCGATT CACGTTGCCA ACCGCAAGAA GTAA
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Protein sequence | MSQKFDVIVI GAGPGGYVAA IKSAQLGLKT ALIEKYKGKE GKTALGGTCL NVGCIPSKAL LDSSYKFHEA HESFKLHGIS TGEVAIDVPT MIARKDQIVR NLTGGVASLI KANGVTLFEG HGKLLAGKKV EVTAADGSSQ VLDTENVILA SGSKPVEIPP APVDQDVIVD STGALDFQNV PGKLGVIGAG VIGLELGSVW ARLGAEVTVL EAMDKFLPAV DEQVAKEAQK ILTKQGLKIL LGARVTGTEV KNKQVTVKFV DAEGEKSQAF DKLIVAVGRR PVTTDLLAAD SGVTLDERGF IYVDDYCATS VPGVYAIGDV VRGAMLAHKA SEEGVVVAER IAGHKAQMNY DLIPAVIYTH PEIAGVGKTE QALKAEGVAI NVGVFPFAAS GRAMAANDTA GFVKVIADAK TDRVLGVHVI GPSAAELVQQ GAIAMEFGTS AEDLGMMVFA HPALSEALHE AALAVSGHAI HVANRKK
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