Gene Avin_29590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29590 
SymboldnaQ 
ID7761860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3057242 
End bp3057976 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID643805832 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_002800100 
Protein GI226945027 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.340517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGCG TCGTACTGGA TACCGAAACC ACCGGCATGC CGGTGACCGA AGGCCACCGG 
ATCATCGAGA TCGGCTGTGT CGAGCTGCAG GGGCGGCGTC TCACCGGGCG GCATTTCCAC
GTCTATCTGC AGCCGGACCG CACGGTGGAC GAGGGCGCCG TCGCGGTGCA CGGCATCACC
GACGATTTCC TCGCCGACAA GCCGCGGTTC GCCGACATCG CCGAGGAGTT CTTCGAGTTC
ATCAAGGGCG CCCAACTGAT CATCCACAAC GCGGCGTTCG ATATCGGCTT CATCGAGGAC
GAGTTCTCCC GGCTGGGACA GACCGAGCGC GCCGACGTCA ATGCCCATTG CACGGTGCTC
GACACCCTGC TGATGGCCCG CGAGCGCCAC CCCGGCCAGC GCAACAGCCT CGACGCCCTG
TGCAAGCGCT ACGACGTCGA CAACTCCAAC CGCGACCTGC ACGGCGCGCT GCTCGACGCC
GAGATCCTCG CCGACGTCTG GCTGGCCATG ACCGGTGGGC AGACGCACCT GTCGCTGTCC
GGCGAGGGGA GCGAGAACGG GGGCCGCGCC CAGGCTTCGG CGATCCGCCG GCTGTCGCCG
GAGCGTCAGC GCACCCGGGT GATCCGCGCC GGCGAGCAGG AGCTGGCCGC GCATGCCGAG
CGGCTGGCGG CGATCGAGAA GGCCGCCGGC GCTCCGCCGC TGTGGCTGCA GATGGAGCAG
GCGCAGCAGC AGTAG
 
Protein sequence
MRSVVLDTET TGMPVTEGHR IIEIGCVELQ GRRLTGRHFH VYLQPDRTVD EGAVAVHGIT 
DDFLADKPRF ADIAEEFFEF IKGAQLIIHN AAFDIGFIED EFSRLGQTER ADVNAHCTVL
DTLLMARERH PGQRNSLDAL CKRYDVDNSN RDLHGALLDA EILADVWLAM TGGQTHLSLS
GEGSENGGRA QASAIRRLSP ERQRTRVIRA GEQELAAHAE RLAAIEKAAG APPLWLQMEQ
AQQQ