Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_29510 |
Symbol | |
ID | 7761853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3040905 |
End bp | 3041657 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643805825 |
Product | ABC-type antimicrobial peptide transport system, ATPase component |
Protein accession | YP_002800093 |
Protein GI | 226945020 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACCA TCACTTCGAT AGGCATGGCC CCGCTCGTCG AGCTGCGCCG GGCCACCAAG CACTACCAGA TCGGCGAAAA GCCGGTGATC GCCCTCAAGG GCATCGACAT CAGCATCCAG GAGCGCGAGT TCGTCGCTAT CTGGGGACCC TCGGGGTCCG GCAAGTCGAC CCTGTGCAAC CTCATCGGCA TGCTCGACTC GCCCACCTCG GGCAGCGTGC TGATCGACGG CCGGGAGGTC GACGACCTGT CGGACAACGC CCGCAGCGAG CTGCGCAACC GGACCATCGG CTTCGTCTTC CAGAACTTCA ACCTGATACC GGTGCTCTCG GCGCTGGAGA ACGTCATGCT GCCGCTGCAG ATCGCCGGCG CTTCCTCCGT CGTCGCCCGG GAGCGGGCGC TGGAGCGGCT GACCGAGGTG GGCCTCGAGA AGCACGTCGC CCACCGTCCG GCCAAGCTTT CCGGCGGCCA GCAGCAGCGG GTCGCCATCG CCCGGGCGCT GGTCACCGAC CCGGCCCTGG TGATCGCCGA CGAACCCACC GCCAACCTCG ACTCCGGCAA CGCCCGACGG ATCATCGAGC TGATGCTCGA CATCAACGCC AGCCACGGCA CCGCCTTCGT CTTCTCGACC CATGACCAGC GCCTGCTGGA GAGCGTCAAG CGCCGGGTCC TGATGCAGGA CGGCGAGATC GGCAGCGACA GCCAGCCGGC GCGTCCGGGA GCGCAGACCC GCATCGCAGG GAGCCGCCCA TGA
|
Protein sequence | MNTITSIGMA PLVELRRATK HYQIGEKPVI ALKGIDISIQ EREFVAIWGP SGSGKSTLCN LIGMLDSPTS GSVLIDGREV DDLSDNARSE LRNRTIGFVF QNFNLIPVLS ALENVMLPLQ IAGASSVVAR ERALERLTEV GLEKHVAHRP AKLSGGQQQR VAIARALVTD PALVIADEPT ANLDSGNARR IIELMLDINA SHGTAFVFST HDQRLLESVK RRVLMQDGEI GSDSQPARPG AQTRIAGSRP
|
| |