Gene Avin_29510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29510 
Symbol 
ID7761853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3040905 
End bp3041657 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID643805825 
ProductABC-type antimicrobial peptide transport system, ATPase component 
Protein accessionYP_002800093 
Protein GI226945020 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA TCACTTCGAT AGGCATGGCC CCGCTCGTCG AGCTGCGCCG GGCCACCAAG 
CACTACCAGA TCGGCGAAAA GCCGGTGATC GCCCTCAAGG GCATCGACAT CAGCATCCAG
GAGCGCGAGT TCGTCGCTAT CTGGGGACCC TCGGGGTCCG GCAAGTCGAC CCTGTGCAAC
CTCATCGGCA TGCTCGACTC GCCCACCTCG GGCAGCGTGC TGATCGACGG CCGGGAGGTC
GACGACCTGT CGGACAACGC CCGCAGCGAG CTGCGCAACC GGACCATCGG CTTCGTCTTC
CAGAACTTCA ACCTGATACC GGTGCTCTCG GCGCTGGAGA ACGTCATGCT GCCGCTGCAG
ATCGCCGGCG CTTCCTCCGT CGTCGCCCGG GAGCGGGCGC TGGAGCGGCT GACCGAGGTG
GGCCTCGAGA AGCACGTCGC CCACCGTCCG GCCAAGCTTT CCGGCGGCCA GCAGCAGCGG
GTCGCCATCG CCCGGGCGCT GGTCACCGAC CCGGCCCTGG TGATCGCCGA CGAACCCACC
GCCAACCTCG ACTCCGGCAA CGCCCGACGG ATCATCGAGC TGATGCTCGA CATCAACGCC
AGCCACGGCA CCGCCTTCGT CTTCTCGACC CATGACCAGC GCCTGCTGGA GAGCGTCAAG
CGCCGGGTCC TGATGCAGGA CGGCGAGATC GGCAGCGACA GCCAGCCGGC GCGTCCGGGA
GCGCAGACCC GCATCGCAGG GAGCCGCCCA TGA
 
Protein sequence
MNTITSIGMA PLVELRRATK HYQIGEKPVI ALKGIDISIQ EREFVAIWGP SGSGKSTLCN 
LIGMLDSPTS GSVLIDGREV DDLSDNARSE LRNRTIGFVF QNFNLIPVLS ALENVMLPLQ
IAGASSVVAR ERALERLTEV GLEKHVAHRP AKLSGGQQQR VAIARALVTD PALVIADEPT
ANLDSGNARR IIELMLDINA SHGTAFVFST HDQRLLESVK RRVLMQDGEI GSDSQPARPG
AQTRIAGSRP