Gene Avin_29400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29400 
Symbol 
ID7761842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3030956 
End bp3031813 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID643805814 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_002800082 
Protein GI226945009 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.559964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCTG AAGGATCGAC GCTGGGCGGG CGGATAACCT CCTCCACACC GCGCACCGCC 
CAGGCTTCGT CCCGTCCGGG CGGCACGCGG CTGGTGCCGC GGCGGCTCAC GCCGCTGGGC
CGGCTGCTGG GACCGCTCGT CCTGCTGGCC CTGTGGGAAC TGGCAGCGCA GACCGGCCTG
CTTTCGCCGA AACTGCTGGC CGCCCCCTCC ACCGCGCTGA TAACCGGGTA CGACATGCTG
GCCAACGGGA CCCTGCTGCC GCACTGGCTG GCCTCGGCCT GGCGCGCCTG GTGGGGCCTG
GGCATCGGCG TGGCCGCCGC CGTGCTGCTG GCGCTGGCCT CCGGCCTGAC GCGCATCGGA
GAAGCCTCGA TCGACTCGCT GGTGCAGATC AAGCGGGCCA TCCCCACGCT GGCGCTGATT
CCGCTGGCGA TCCTCTGGCT CGGTATCGGC GAGACAATGA AGATCGCCCT GATCGCCGGC
AGCGTGTTCG TGCCCGTCTA CATCAACACC CACGCGGCGA TCAAAGGCAT CGACATCCGC
CATGTGGAAC TGGCCCGCAC GCTGGGGCTG GGCAAGGCGG TGTTCATTCG CCGGATCGTC
CTGCCCGGCG CCCTGCCCGG CTTCTTCACC GGGCTGCGCC TGTCGGTCAC CAGTTGCTGG
GCTTCGCTGG TGGTGCTGGA ACAGATCAAC ACCACCCAGG GCATCGGCTA CCTGATGAAC
CGCGCCCGCG ATTACGGGCA GACCGAAATC ATCGTCGTCG GCCTGGTGAT CTACATGGTT
CTCGGCCTGG CATCGGACGC GGCGGTCAGG GCTATCGAAC GCTCGACACT GCGCTATCGG
AAGGTGATCG GCTCATGA
 
Protein sequence
MSAEGSTLGG RITSSTPRTA QASSRPGGTR LVPRRLTPLG RLLGPLVLLA LWELAAQTGL 
LSPKLLAAPS TALITGYDML ANGTLLPHWL ASAWRAWWGL GIGVAAAVLL ALASGLTRIG
EASIDSLVQI KRAIPTLALI PLAILWLGIG ETMKIALIAG SVFVPVYINT HAAIKGIDIR
HVELARTLGL GKAVFIRRIV LPGALPGFFT GLRLSVTSCW ASLVVLEQIN TTQGIGYLMN
RARDYGQTEI IVVGLVIYMV LGLASDAAVR AIERSTLRYR KVIGS