Gene Avin_29280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29280 
Symbol 
ID7761831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3018633 
End bp3019799 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID643805804 
Productsugar ABC transport system, periplasmic substrate-binding protein 
Protein accessionYP_002800072 
Protein GI226944999 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTGGT GGGTTTCCAG CGGCGAGCGG GCCAGCATCG AGGTGCTGCG CGAGCGAATC 
CGCGCCCAGG GCCTGGAGTG GCGCGAGCAG GCCGTCGCCG GCAGCGGCAC CGCCCGCTAT
ATCAACGAGT TGCGCAAGCG CGTCGCCGGC GGCCGGCCGC CCAGTGCTTC GCAGATGATC
GGCTTCGACA TCCAGGAATG GGCCAGGGCC GGCCACCTGG AGTCGCTCGA CGAAGCGGCG
GCGCGCAACG AATGGGACGA GGTCGTGCCC TTCGGCATCC AGGCGCTCTC GAAATACCAG
GGGCACTGGT ACGCCGCGCC GATCAACACG CACTCGACCA ACTGGCTGTG GATGAATCAG
CGCCTGCTGG AGAAACTCGG CTCGCCGCCC GCCCCGGATA CCTGGGACGA CCTGGTCCTG
CTGCTCGAAC GCGCCAGGAC CGCCGGCATG CTCCCGCTGG CGGTCGGGCG GGAAGCCTGG
GAACACACCT TGCTGTTCGA ATCGGTCGCG GTGTCGACCG GCGGCGCCGA ATTCTATCGG
CGCGCCTTCG TGGAACTCGA TGCCGAGGCG CTGCCCCTGC CGCTGGCGAT CCGCATCTTC
GAGCGGATGC GGGTGCTGTC GCGCTTCGTC GATCCGGGTT TTCGCCGGCG CCGCTGGGAC
CAGGCCACGG ACCTGGTGCG CAAGGGCGAG GCCCTGCTGC AGGTGCAGGG CACCTGGGTC
GACGGGGAAT TCGCCCTGCA CGGCATGCAG CCGGGCAGGG ACTTCCAGTG TTTCCGGTTT
CCCGACACCC AGGGCGTGGT GCTGTTCAAC AGCGATCAGT ACGTGCTGTT GAAGAACGGG
CCGGGCAGCC AGGCGGCCCG GCGGATTCTG CTCGACACCC TGATGGACCC CGACTTCCAG
GCCGCGGTCA ATCGCCGCTC CGGCGCCATC CCGGCACGCG TCGACGTGCC CAAGGACGGC
TTCGACGCCT GCGGCCAGCG GGCCATCGAC GACATGCGCG GCGCCAACAT GAGACGCACC
ATGATGGGTT CGATCGCCAT GGGCAACGCC AACCTGCCCG CCGTCAAGAC CGCCATCTAC
AGCGTGGTGA GCCGCCATCT CGAAGGCGAA CTCGACGACG TCCGGGCGGC CGAAGCGCTG
CTGCGGGCGC TTTCCGGAGA ACCCTGA
 
Protein sequence
MHWWVSSGER ASIEVLRERI RAQGLEWREQ AVAGSGTARY INELRKRVAG GRPPSASQMI 
GFDIQEWARA GHLESLDEAA ARNEWDEVVP FGIQALSKYQ GHWYAAPINT HSTNWLWMNQ
RLLEKLGSPP APDTWDDLVL LLERARTAGM LPLAVGREAW EHTLLFESVA VSTGGAEFYR
RAFVELDAEA LPLPLAIRIF ERMRVLSRFV DPGFRRRRWD QATDLVRKGE ALLQVQGTWV
DGEFALHGMQ PGRDFQCFRF PDTQGVVLFN SDQYVLLKNG PGSQAARRIL LDTLMDPDFQ
AAVNRRSGAI PARVDVPKDG FDACGQRAID DMRGANMRRT MMGSIAMGNA NLPAVKTAIY
SVVSRHLEGE LDDVRAAEAL LRALSGEP