| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_29240 |
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| Symbol | metH |
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| ID | 7761827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 3013613 |
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| End bp | 3017449 |
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| Gene Length | 3837 bp |
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| Protein Length | 1278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643805800 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002800068 |
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| Protein GI | 226944995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGGCG GCGACAGCGA AGCTGCCGCC GTGCAACATG AACGTGCCTC ATGCAAAAGC
GGCCCCACCT CGAAAGCCGT GCAGCTTTGC TATTATCTGC ACCCTTTCCC CCGGCTTTAC
CCAGGTATTT CCTTCATGTC CGACCGCGCC GCCCGCCTCC AGGCCCTCCA GCAAGCCCTC
AAGGAACGCA TCCTGATCCT CGACGGCGGC ATGGGCACCA TGATCCAGAG CTACAAACTG
GAGGAGTCCG ACTATCGCGG TACACGCTTC GCCGACTGGC CGCAGGACGT CAAAGGCAAC
AACGACCTGC TGCTGTTGAC CCGCCCGGAC GTGATCCAGG CCATCGAGCA GGCCTACCTG
GACGCCGGCG CCGATATCCT CGAAACCAAC ACCTTCAACG CCACCCGGGT GTCCCAGGCC
GACTACGGCA TGGAAGAGCT GGTCTACGAA CTGAACGTGG AAGGCGCGCG CCTGGCCCGC
CAGGTGGCCG ACGCCAAGAG CGCCGAGAAC CCGGCCAGGC CGCGCTTCGT CGCCGGGGTG
ATCGGCCCGA CCAGCCGCAC CTGCTCGATC TCCCCGGACG TCAACAACCC CGGCTATCGC
AACGTCACCT TCGACGAACT GGTGGACAAC TACACCGAGG CCACCCGTGG CCTGATCGAG
GGCGGCGCCG ACCTGATCCT CATCGAGACC ATCTTCGACA CCCTGAATGC CAAGGCGGCG
ATCTACGCCG TGCAGCAGGT GTTCGAGGAG GACGGCGTTT CACTGCCGAT CATGATCTCC
GGCACCATCA CCGACGCCTC CGGCCGCACC CTGTCCGGGC AGACCACCGA GGCCTTCTGG
AACTCGGTGC GCCACGCCGA GCCCATTTCC GTGGGCCTGA ACTGCGCCCT CGGCGCCAAG
GACCTGCGCC CCTATCTGGA AGAGTTGGCG ACCAAGGCCG ACACCCACGT CTCCGCCCAC
CCCAACGCCG GCCTGCCCAA CGCCTTCGGC GAATACGACG AGACGCCCGC GCAGATGGCC
GAGGTGATCG AGGAATTCGC CGCCGCGGGC TTTCTCAACA TCGTCGGCGG CTGCTGCGGC
ACCACCCCGG CGCACATCCG GGCCATCGCC GAGGCGGTGG CCAAATACCC ACCGCGCGCC
ATCCCCGAGA TCCCGCGCGC CTGCCGCCTG TCGGGCCTGG AGCCCTTCAC CATCGACCGC
GACTCGCTGT TCGTGAACGT CGGCGAGCGC ACCAACATCA CCGGCTCCGC CCGCTTCGCC
CGGCTGATCC GCGAGGAGAA CTACGCCGAG GCGCTGGACG TGGCGCGCCA GCAGGTAGAA
GCCGGCGCCC AGGTGATCGA CATCAACATG GACGAGGGCA TGCTGGATTC GAAGGCGGCG
ATGGTCACCT TCCTCAACCT GATCGCCTCC GAGCCGGACA TCTCCCGCGT GCCGATCATG
ATCGACTCCT CCAAGTGGGA GGTGATCGAG GCGGGCCTCA AGTGCATCCA GGGCAAGGGC
ATCGTCAACT CGATCTCCAT GAAGGAAGGC GTCGAGCCCT TCAAGCACCA CGCCCACCTG
TGCAAGCGCT ACGGCGCCGC CGTGGTGGTG ATGGCCTTCG ACGAAGCAGG CCAGGCCGAC
ACCGCCGCGC GCAAGCGGGA AATCTGCCAG CGCTCCTACG ACATCCTGGT CGACGAGGTG
GGCTTCCCGC CGGAAGACAT CATCTTCGAC CCGAACATCT TCGCCGTCGC CACCGGCATC
GAAGAACACA ACAACTACGC GGTGGACTTC ATCGAGGCCT GCGCCTACAT CCGCGACAAC
CTGCCCTACG CCTTGTCGTC CGGCGGTGTG TCCAACGTGT CCTTCTCGTT CCGCGGCAAC
AACCCGGTGC GCGAGGCGAT CCACTCGGTG TTCCTCTACC ACGCCATCCG CAACGGCCTG
ACCATGGGCA TCGTCAATGC CGGGCAACTG GAGATCTACG ACGAGATCCC CGAGGAGCTG
CGCGACAAGG TCGAGGACGT GGTGCTCAAC CGCCACCCCG GCGCCACCGA GGCGCTGCTG
GCCATCGCCG ACCGGTACAA GGGCGACGGC ACGGTCAAGG AGGCCGAAAC CGAGGAGTGG
CGCGGCTATC CGGTGGGCAA GCGCCTGGAG CACGCGCTGG TCAAGGGCAT CACCACCTGG
ATCGTCGAGG ACACCGAGGA ATGCCGCCGG CAGTGCGCGC GGCCCATCGA GGTCATCGAA
GGCCCGTTGA TGAGCGGCAT GAACGTGGTC GGCGACCTGT TCGGCGCCGG CAAGATGTTC
CTGCCCCAGG TAGTCAAGTC CGCGCGGGTG ATGAAACAGG CGGTGGCCCA CCTGATCCCC
TTCATCGAGG CCGAGAAGGG CGACAAGCCG GAAGCCAAGG GCAAGATCCT CATGGCCACG
GTGAAGGGCG ACGTGCACGA CATCGGCAAG AACATCGTCG GCGTGGTGCT CGGCTGCAAC
GGCTACGACG TGGTCGACCT CGGCGTGATG GTGCCGGCTG AGAAGATCCT GCAGACCGCC
CGCGAGGAAA AGTGCGACAT CATCGGCCTC TCCGGCCTGA TCACCCCGTC GCTCGACGAG
ATGGTCCACG TCGCCCGAGA AATGCAGCGC CAGGGCTTCG CCCTGCCGCT GATGATCGGC
GGCGCCACCA CCTCCAAGGC GCACACCGCG GTGAAGATCG AGCCGCAGTA CGCCAACGAC
GCGGTGGTCT ACGTCACCGA CGCCTCGCGC GCGGTGGGCG TGGCCACCTC GCTGCTGTCG
AAGGAGCTGA AGCCCGACTA CGTGGCGAAG ATCCGCACCG ACTACGCCGA AGTGCGCGAA
CGCACCGCCA ACCGCGGCGC CCGCGCCGAG CGCCTGAGCT ACGCCCAGGC CGTGGCCAAC
AAGCCGCAGC TCGACTGGAC CGGCTACCGG CCGCCGCAGC CCGCCTTCAC CGGCGTCAAG
GTGCTGGAGG ACATCGACCT CGCGGTGCTC GCCGGCTACA TCGACTGGAC GCCCTTCTTC
ATGTCCTGGG ACCTGGCCGG CAAGTACCCG CGCATCCTCG AGGACGCAGT GGTCGGCGAA
GCCGCCAGCG CGCTGTTCAA GGACGCCCAG GGGATGCTGA AGAAGCTGAT CGACGAAAAG
CTCATCCGTG CCAAGGCCGT CTTCGGCTTC TGGCCGGCCA ACCAGGTGCG CGACGACGAC
CTGGAAGTCT ACGGCGACGA CGGCCGACCG CTGGCCACCC TGCACCACCT GCGCCAGCAG
GCCGCCAAGC CCGACGGCAA GCCCAACCAG TCCCTGGCGG ACTTCGTCGC GCCGAAGGAC
TCGGGCGTCA CCGACTATGT GGGCGGCTTC ATCGTCACCG CCGGCATCGG CGCCGAGGAA
CTGGCCAAGG CCTACCAGGA CCAGGGCGAC GACTACAGTT CGATCATGGT CAAGGCCCTG
GCCGACCGCC TTGCCGAAGC CTGCGCCGAA TGGCTGCACG AACGGGTGCG CAAGGAATAC
TGGGGCTATG CGCCGAACGA GCGGCTTTCC AACGAGGAAC TGATCAAGGA GCAATACAAG
GGCATCCGCC CCGCCCCCGG TTACCCGGCC TGCCCCGACC ACACGGAAAA AGGCACCCTG
TTCCGCCTGC TCGACCCGCA GGGCACTAGC GGCGTGACCC TCACCGAACA CTACGCCATG
TTCCCCGCCG CCGCCGTCAG CGGCTGGTAC TTCGCCCACC CCGAGGCGAA ATACTTCGCC
GTCGGCAAGA TCGACCGGGA TCAGGTGGAA AGCTACTCGC AACGCAAGGG ACAGAGCGTC
GAGGAGAGCG AGCGGTGGCT GATGCCGAAC TTGGGATATG AGGCGACAAC CCCGTAA
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| Protein sequence | MPGGDSEAAA VQHERASCKS GPTSKAVQLC YYLHPFPRLY PGISFMSDRA ARLQALQQAL
KERILILDGG MGTMIQSYKL EESDYRGTRF ADWPQDVKGN NDLLLLTRPD VIQAIEQAYL
DAGADILETN TFNATRVSQA DYGMEELVYE LNVEGARLAR QVADAKSAEN PARPRFVAGV
IGPTSRTCSI SPDVNNPGYR NVTFDELVDN YTEATRGLIE GGADLILIET IFDTLNAKAA
IYAVQQVFEE DGVSLPIMIS GTITDASGRT LSGQTTEAFW NSVRHAEPIS VGLNCALGAK
DLRPYLEELA TKADTHVSAH PNAGLPNAFG EYDETPAQMA EVIEEFAAAG FLNIVGGCCG
TTPAHIRAIA EAVAKYPPRA IPEIPRACRL SGLEPFTIDR DSLFVNVGER TNITGSARFA
RLIREENYAE ALDVARQQVE AGAQVIDINM DEGMLDSKAA MVTFLNLIAS EPDISRVPIM
IDSSKWEVIE AGLKCIQGKG IVNSISMKEG VEPFKHHAHL CKRYGAAVVV MAFDEAGQAD
TAARKREICQ RSYDILVDEV GFPPEDIIFD PNIFAVATGI EEHNNYAVDF IEACAYIRDN
LPYALSSGGV SNVSFSFRGN NPVREAIHSV FLYHAIRNGL TMGIVNAGQL EIYDEIPEEL
RDKVEDVVLN RHPGATEALL AIADRYKGDG TVKEAETEEW RGYPVGKRLE HALVKGITTW
IVEDTEECRR QCARPIEVIE GPLMSGMNVV GDLFGAGKMF LPQVVKSARV MKQAVAHLIP
FIEAEKGDKP EAKGKILMAT VKGDVHDIGK NIVGVVLGCN GYDVVDLGVM VPAEKILQTA
REEKCDIIGL SGLITPSLDE MVHVAREMQR QGFALPLMIG GATTSKAHTA VKIEPQYAND
AVVYVTDASR AVGVATSLLS KELKPDYVAK IRTDYAEVRE RTANRGARAE RLSYAQAVAN
KPQLDWTGYR PPQPAFTGVK VLEDIDLAVL AGYIDWTPFF MSWDLAGKYP RILEDAVVGE
AASALFKDAQ GMLKKLIDEK LIRAKAVFGF WPANQVRDDD LEVYGDDGRP LATLHHLRQQ
AAKPDGKPNQ SLADFVAPKD SGVTDYVGGF IVTAGIGAEE LAKAYQDQGD DYSSIMVKAL
ADRLAEACAE WLHERVRKEY WGYAPNERLS NEELIKEQYK GIRPAPGYPA CPDHTEKGTL
FRLLDPQGTS GVTLTEHYAM FPAAAVSGWY FAHPEAKYFA VGKIDRDQVE SYSQRKGQSV
EESERWLMPN LGYEATTP
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