Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_28990 |
Symbol | |
ID | 7761802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2992301 |
End bp | 2993530 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643805775 |
Product | Major facilitator superfamily transporter, MFS_1 |
Protein accession | YP_002800043 |
Protein GI | 226944970 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGCA CGCACGCCAC AGCCCCCGTA CGGAGCGAAA CCCTGCAGAT CCTCTCCATC GTCTGCTTCT CCTTTCTCGG CTTCATGAGC ATCGGCATCC CCATGGCGGT CATGCCCGGG CTGATCCACC ACGAACTGGG CTTCAGCACC CTGGTCGCCG GCCTGGTGAT CGGCCTGCAG TATCTGGTCA CGCTGCTGGT GCGTCCCTTT TCCTGCCGGG TGATCGACAG CGCGGGTCCC AGGCAGGGCG TCGTCTACGG ACTGGCCGGT TGCGCCCTGG GCGGCCTGCT GATGCTGCTG GCCACGCTCT GGCTGGCCCT GCCGGCGCTC AGCCTGCTCA TCCTGGTGCT CAGCCGCCTG GTGCTGGGCA TGGCCCATAG CGTGCTCGGC TCCTCGGCGA TCGCCTGGGG AATCGGCCAG GTCGGCATCG CCGGTACCGC CCGGGTGATT TCCTGGAACG GCATCGCCAG CTATGGCGCG ATCGGTCTGG GAGCGCCCTT CGGTGTCTGG CTGGTGGAAC GCTTCGGCCT GCCCGGCATG GGCGCCAGCG TACTGCTGAT CGCCCTCTTC GGGCTCGCCA TGGCCTGGCG CAAGGCCGGC GTGCCAGTGG TCGCCGGCGA GCGCCTGGGC TTCCTGGAGG TGCTCGGGCG GGTCTCTCCG CACGGCCTGG CCATGGCCCT CGGCACCCTC GGCTACGGCA CCATCGCCGC CTTCATCACC CTCTACTACG GCAGCCGCGG CTGGGCCTGG GCGGAATACG CGATGACCGC CTTCGGCCTA AGCTTCATCG CCGCCCGCCT GCTGTTCGCC CAGGCGATCG ACCGGCTCGG CGGCTACCGG GTGGGCATCG CCTCGCTGCT GGTCGAGGCC TGCGGCCTGC TGCTGATCTG GGCGGCGCCC GGCCCGCTGC TGGCGATGCT CGGCGCGGGA CTGAGCGGAT TCGGCTTCTC GCTGGTGTTT CCGGCCCTGG GCGTGGAAGC GGTGAAGAGC GCGCCGGCCT CGAACCGTGG TGCGGCGATC GGCGCCTATT CGCTGTTTCT CGATCTGGCC CTGGGCGTCG CCGGGCCGCT GATCGGCCTG CTCATCGGCA GCCATGGCTT TCGCCCGATC TTTCTGGTCT GCGCGCTGGC TTCCTTCTGC GGCCTCGGCC TGACCCTGGC CCTGCAGCAG CGCAGCTTCC GCCAGCCCGC CGAAGCCGAG GAGGCAGCGG CGACGGCCGA GCTGGAGTAG
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Protein sequence | MSRTHATAPV RSETLQILSI VCFSFLGFMS IGIPMAVMPG LIHHELGFST LVAGLVIGLQ YLVTLLVRPF SCRVIDSAGP RQGVVYGLAG CALGGLLMLL ATLWLALPAL SLLILVLSRL VLGMAHSVLG SSAIAWGIGQ VGIAGTARVI SWNGIASYGA IGLGAPFGVW LVERFGLPGM GASVLLIALF GLAMAWRKAG VPVVAGERLG FLEVLGRVSP HGLAMALGTL GYGTIAAFIT LYYGSRGWAW AEYAMTAFGL SFIAARLLFA QAIDRLGGYR VGIASLLVEA CGLLLIWAAP GPLLAMLGAG LSGFGFSLVF PALGVEAVKS APASNRGAAI GAYSLFLDLA LGVAGPLIGL LIGSHGFRPI FLVCALASFC GLGLTLALQQ RSFRQPAEAE EAAATAELE
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