Gene Avin_28990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28990 
Symbol 
ID7761802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2992301 
End bp2993530 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID643805775 
ProductMajor facilitator superfamily transporter, MFS_1 
Protein accessionYP_002800043 
Protein GI226944970 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCA CGCACGCCAC AGCCCCCGTA CGGAGCGAAA CCCTGCAGAT CCTCTCCATC 
GTCTGCTTCT CCTTTCTCGG CTTCATGAGC ATCGGCATCC CCATGGCGGT CATGCCCGGG
CTGATCCACC ACGAACTGGG CTTCAGCACC CTGGTCGCCG GCCTGGTGAT CGGCCTGCAG
TATCTGGTCA CGCTGCTGGT GCGTCCCTTT TCCTGCCGGG TGATCGACAG CGCGGGTCCC
AGGCAGGGCG TCGTCTACGG ACTGGCCGGT TGCGCCCTGG GCGGCCTGCT GATGCTGCTG
GCCACGCTCT GGCTGGCCCT GCCGGCGCTC AGCCTGCTCA TCCTGGTGCT CAGCCGCCTG
GTGCTGGGCA TGGCCCATAG CGTGCTCGGC TCCTCGGCGA TCGCCTGGGG AATCGGCCAG
GTCGGCATCG CCGGTACCGC CCGGGTGATT TCCTGGAACG GCATCGCCAG CTATGGCGCG
ATCGGTCTGG GAGCGCCCTT CGGTGTCTGG CTGGTGGAAC GCTTCGGCCT GCCCGGCATG
GGCGCCAGCG TACTGCTGAT CGCCCTCTTC GGGCTCGCCA TGGCCTGGCG CAAGGCCGGC
GTGCCAGTGG TCGCCGGCGA GCGCCTGGGC TTCCTGGAGG TGCTCGGGCG GGTCTCTCCG
CACGGCCTGG CCATGGCCCT CGGCACCCTC GGCTACGGCA CCATCGCCGC CTTCATCACC
CTCTACTACG GCAGCCGCGG CTGGGCCTGG GCGGAATACG CGATGACCGC CTTCGGCCTA
AGCTTCATCG CCGCCCGCCT GCTGTTCGCC CAGGCGATCG ACCGGCTCGG CGGCTACCGG
GTGGGCATCG CCTCGCTGCT GGTCGAGGCC TGCGGCCTGC TGCTGATCTG GGCGGCGCCC
GGCCCGCTGC TGGCGATGCT CGGCGCGGGA CTGAGCGGAT TCGGCTTCTC GCTGGTGTTT
CCGGCCCTGG GCGTGGAAGC GGTGAAGAGC GCGCCGGCCT CGAACCGTGG TGCGGCGATC
GGCGCCTATT CGCTGTTTCT CGATCTGGCC CTGGGCGTCG CCGGGCCGCT GATCGGCCTG
CTCATCGGCA GCCATGGCTT TCGCCCGATC TTTCTGGTCT GCGCGCTGGC TTCCTTCTGC
GGCCTCGGCC TGACCCTGGC CCTGCAGCAG CGCAGCTTCC GCCAGCCCGC CGAAGCCGAG
GAGGCAGCGG CGACGGCCGA GCTGGAGTAG
 
Protein sequence
MSRTHATAPV RSETLQILSI VCFSFLGFMS IGIPMAVMPG LIHHELGFST LVAGLVIGLQ 
YLVTLLVRPF SCRVIDSAGP RQGVVYGLAG CALGGLLMLL ATLWLALPAL SLLILVLSRL
VLGMAHSVLG SSAIAWGIGQ VGIAGTARVI SWNGIASYGA IGLGAPFGVW LVERFGLPGM
GASVLLIALF GLAMAWRKAG VPVVAGERLG FLEVLGRVSP HGLAMALGTL GYGTIAAFIT
LYYGSRGWAW AEYAMTAFGL SFIAARLLFA QAIDRLGGYR VGIASLLVEA CGLLLIWAAP
GPLLAMLGAG LSGFGFSLVF PALGVEAVKS APASNRGAAI GAYSLFLDLA LGVAGPLIGL
LIGSHGFRPI FLVCALASFC GLGLTLALQQ RSFRQPAEAE EAAATAELE