| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28980 |
|---|
| Symbol | ppiC |
|---|
| ID | 7761801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2991864 |
|---|
| End bp | 2992142 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643805774 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_002800042 |
|---|
| Protein GI | 226944969 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG CGATGGCACG TCACATTCTG CTCGCCAGCG AAGCCGAGGC CGCGCGGCTG
AAGCAACGCC TGGCCGGCGG CGAGGACTTC GCCCGGCTTG CGCGCCGCCA TTCGCTCTGC
CCCTCCGGCA AGCGTGGCGG CGATCTCGGC GAGATCCGTC CGGGGCAGTT GGTGCGCCCG
ATCGACCAGG TGATCTTCCG GAAGGCCCTG CGCGAGATCC ATGGCCCGGT GAAGTCGCAG
TTCGGCTATC ACCTGGTGCA GGTGTTCTAC CGCGACTGA
|
|---|
| Protein sequence | MAKAMARHIL LASEAEAARL KQRLAGGEDF ARLARRHSLC PSGKRGGDLG EIRPGQLVRP
IDQVIFRKAL REIHGPVKSQ FGYHLVQVFY RD
|
|---|
| |