| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28970 |
|---|
| Symbol | |
|---|
| ID | 7761800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2990251 |
|---|
| End bp | 2991183 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643805773 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002800041 |
|---|
| Protein GI | 226944968 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.91786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATATC ATCCATGTTT ATTTAGTGAT CGTCCATACA TGAGCGACCC ACTTTCCGAG
GTAGTTCGAC TTCTGCACCC ACGTGCGGCT TTTGCCAACA TCATTAGCGG CAAAGGAAAC
TGGGCTGTGC GCTATTCCGA ATTTGGCCTG CCCAGTTTCT GCATCGTATT GAAAGGAAGC
TGCCTATTGA CGGTTGACAG GCATGAGCAA ATCACCATCA GCGCGGGTGA TTTCATCCTG
CTGCCCACAA CACCGGCCTT CACCATATCG AGCTTCGCGC CAGTGCCTCC GGTCTATTTG
GACCCCAATA AAGTTGTTCG CGGTAGCGAG CTGCGCTATG GCGAACAAGA AGGCTCCCCA
GACATGCGGT CGCTGGGAGG TTCATTCCTG TTCGATTGTT CTGATCCCGG GCTGCTGGTT
TCCCTGTTGC CCAAAGTGGT TCACGTGCAG AATTCGGTTC GCTTGTCGCA GTTGGTGCAG
ATGGTGAGCG AAGAATCCAC TGGCCAAAAG CCGGGCAGCG AGTTCATGCT GTCCCGGTTG
GTGGAATTGC TGCTCGTGGA AGCAATGCGC TCGGCGGCGG CCGGAAACGC CCCTCCGGGG
TTGTTGCGAG GCTTGGGGGA TGAGCGAATG GCGCGTGCGC TGAAGCAAAT GCATGCTCGT
ATCGATCATC CTTGGACCGT TGACCAGTTG GCGAAGATTT CGGCCCTTTC CCGTTCCGCG
TTCTATGAGC GTTTCACACG CATGGTAGGG GTGGCGCCGA TGGAGTATCT GCTCGCGTGG
CGCATGGAGA TCGCAAAGGA TCTGCTTCGC GACAACGGTC TGGCAGTTTC CGAGGTCGCT
GAGCGTGTGG GCTACGGTTC GACAAGCACA TTCAGCGTTG CATTTAGCAG GCATGTCGGG
CAACCACCGA GCCGGTACGC ACGGTCAGAA TAA
|
|---|
| Protein sequence | MIYHPCLFSD RPYMSDPLSE VVRLLHPRAA FANIISGKGN WAVRYSEFGL PSFCIVLKGS
CLLTVDRHEQ ITISAGDFIL LPTTPAFTIS SFAPVPPVYL DPNKVVRGSE LRYGEQEGSP
DMRSLGGSFL FDCSDPGLLV SLLPKVVHVQ NSVRLSQLVQ MVSEESTGQK PGSEFMLSRL
VELLLVEAMR SAAAGNAPPG LLRGLGDERM ARALKQMHAR IDHPWTVDQL AKISALSRSA
FYERFTRMVG VAPMEYLLAW RMEIAKDLLR DNGLAVSEVA ERVGYGSTST FSVAFSRHVG
QPPSRYARSE
|
|---|
| |