Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_28820 |
Symbol | |
ID | 7761786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 2972011 |
End bp | 2973336 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643805760 |
Product | secretion protein, HlyD family |
Protein accession | YP_002800028 |
Protein GI | 226944955 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.20411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGC CGAACCTGAA TCCTTCTCCT CCTGCTTATC GCCGCCGCTG GTTGTACTGG ACGCTGGCGT TGCTCGCCGT CGGTGCTTCC GTCGCCTGGT GGCAGTGGCC GGCCTTGTCC GCTCTCTGGA CCCAGTCCTC TCCGGCGGCA GGCGGACCCG AGGCGGGGGC TCCGGCGATG GGGCGCAGGC CTGGCAGGCC GGGAGCTCCC GGCGGTCCGG CGGGCGCGGG CAGCCCCTTC GGCGGGTCGG TGCCGGTGCG CGTCGGCGAG GTGCGCCTGG GCGACTTCCC GGTCGACCTC AAGGCGCTCG GTACGGTCAC CGCCTACAAC ACGGTGAACG TGCGTTCGCG GGTCGACGGC GAACTGATCA AGGTGCTGTT CCGCGAGGGC CAGCAGGTCA AGGCCGGCGA CCTGCTGGCG GTGATCGACC CACGCCTTTA CCAGGCGGCG CTGAAGCAGG CCGAGGGCAC CCTGCAGCAG AACCGTGCGC AACTGCGCAA CGCCGAGATC GATCTGGCCC GCTACAAGAC CCTGTACGCC GAGGACTCCG TCGCCAAGCA GACTCTCGAC ACCCAGGAAG CGCTGGTCGC CCAGTACCAG GGCACGGTCC GTTCCAACCT GGCGGCGGTC GAGGAGGCCA AGGTCAACCT GGAGTACACC CAGGTGCGCT CGCCCATCGC CGGGCGTCTC GGTCTGCGCC AGGTGGACGT CGGCAACCTG GTCACCAGCG GCGACACCAC GCCGCTGGTG ACCATCACCC AGACCCTGCC GATCTCGGTC AGCTTCACTT TGCCCGAGGG CGAGCTGCCG CAGGTCCTCG AGCAGGTGCA GGCCGACCAG CACCTGGCCG TGGAGGCCTG GGACCGCAGC GAGCGCAACC GCCTGGCGGT GGGCGAACTG GAGAGCCTGG ACAACCAGAT CGACCTGACC ACCGGCACCG TGCGCCTCAA GGCGCGCTTC GAGAACGCCG AGCAGCGCCT GTTTCCCAAC CAGTTCGTCA ACGTCCGGCT GCGCGTGACC ACCCGCGAGC AGTCCATGCT GGTGCCGGCG GCGGCGCTGC AGTTCGGCTC CAAAGGCACC TTCGTCTACG TGGTCGGCGA CGACAGCAAG GTGCAGTTGC GCTACGTGAC GGCCGGTCCC GGCGACGGCA CCACGACGCT GATCGAGCAG GGGCTGAGCG CCGGCGAGCG GCTGGTGCTG GAGGGCACCG ATCGCCTGCG CGACGGTGCC AGGGTCGAAG TGATCGACGA CAACCGCCCT GCCGTCGGCG AGGCGTCCGG AGCCGCGCCG GCCGGCCGGC GCCAGGTAGC GAAGCCTGAC GCATGA
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Protein sequence | MSEPNLNPSP PAYRRRWLYW TLALLAVGAS VAWWQWPALS ALWTQSSPAA GGPEAGAPAM GRRPGRPGAP GGPAGAGSPF GGSVPVRVGE VRLGDFPVDL KALGTVTAYN TVNVRSRVDG ELIKVLFREG QQVKAGDLLA VIDPRLYQAA LKQAEGTLQQ NRAQLRNAEI DLARYKTLYA EDSVAKQTLD TQEALVAQYQ GTVRSNLAAV EEAKVNLEYT QVRSPIAGRL GLRQVDVGNL VTSGDTTPLV TITQTLPISV SFTLPEGELP QVLEQVQADQ HLAVEAWDRS ERNRLAVGEL ESLDNQIDLT TGTVRLKARF ENAEQRLFPN QFVNVRLRVT TREQSMLVPA AALQFGSKGT FVYVVGDDSK VQLRYVTAGP GDGTTTLIEQ GLSAGERLVL EGTDRLRDGA RVEVIDDNRP AVGEASGAAP AGRRQVAKPD A
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