| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28790 |
|---|
| Symbol | |
|---|
| ID | 7761783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2965723 |
|---|
| End bp | 2968830 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643805757 |
|---|
| Product | acriflavin resistance protein, AcrB/AcrD/AcrF family |
|---|
| Protein accession | YP_002800025 |
|---|
| Protein GI | 226944952 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTT CCGCTCCCTT CATCCTGCGT CCGGTGGCGA CCCTGCTGCT GAGCGTGGCG
ATCCTGCTGG TCGGCGCGCT GAGCTTCGGT CTGCTGCCGG TGTCGCCGCT GCCGAAGATG
GACTTCCCGG CGATCACCGT GGAGGCCAGC CTGGCCGGGG CCAGTCCGCA GATCATGGCT
TCCAGCGTGG CGACGCCCCT GGAGCGGGCC CTCGGCGGCA TCGCCGGGAT CAGCGAAATG
ACCAGCCGCA GCAGCCAGGG CAGCACGCGG ATCAACATCC TCTTCGACAT CGGCCGCGAT
ATCGACGCCG CCGCCCGCGA GGTGCAGGCG GCGATCAACG CGGCGCGCAC CCTGTTGCCC
AGCGGCATGC GCAGCATGCC CACCTACCGC AAGATCAATC CCTCCCAGGC GCCGATCATG
GTGCTCTCGC TGACCTCGCC GGTGCTCGAC AAGGGCCAGC TCTACGACGT CGCCTCGAGC
ATAGTGGCGC AGAAGCTTTC GCAGGTGAGC GGGGTGGGCC AGGTTCAGGT CGGCGGCAGC
TCGCTGCCGG CGGTGCGGAT CGAACTGGAG CCGCGCCTGC TCGACCAGTA CAACATCGCC
CTCGACGAGG TGCGCCAGGC GATCGCCGCG GCCAACGTGC GGCGGCCCAA GGGCGCGGTG
GAGGACGGCG AGCGCCACTG GCAGGTGCAG GCCAGCGACC AACTGGAGCG CGCCGCCGAC
TACCGGCCGC TGGTGATTCG CTACCAGAAC GACGGGCCGG TGCGCCTGAG CGATGTGGCC
AGGGTCCACG ACGGCCTGGA GGACCGCTAC AACAGCGGCT TCTACAACGA CGAGGACGCG
GTGCTGGTGA TCGTCTACCG ACAGGCCGAC GCCAACATCC TCGAAACCAT CACCGAGATC
CGCGACCGGC TGCCGATGCT GCGCGCGGTG ATCCCGGCCA GCGTCGAGCT GGAAGTGGCG
ATGGACCGCT CGCCGGTGAT CCGCGCCACC CTGCACGAGG CCGAGCGTAC CCTGCTGATC
GCCGTGGCCC TGGTGATCCT GGTGGTGCTG GCCTTCCTCG GCCACTGGCG CGCCGCGCTG
ATCCCCGCGC TGGCGGTGCC GGTGTCGCTG GTCGGCAGCT TCGCGGTGAT GTACCTGTGG
GGCTTCTCCC TGAACAACCT GTCGCTGATG GCGCTGATCA TCGCCACCGG CCTGGTGGTG
GACGACGCCA TCGTGGTGCT GGAGAACATC GCCCGGCACA TCGAGGAGGG CGAGAAGCCG
CTGGCGGCGG CGCTCAAGGG CTCGCGCGAG GTGGGCTTCA CCCTGCTGTC GATGAACCTG
TCGCTGGTGG TGGTGTTCCT CTCCATCCTG TTCATGGGCG GTATCATCGA GCGGCTGTTC
CGTGAGTTCT CCATCACCCT GGCGGTGGCC ATCCTGATTT CCCTGCTGGT CTCGCTGACC
CTGACGCCGA TGCTCTGCGC GCGCTGGCTG AAGTCCGGGC AGGAGGCCCG CGCGCCCGGT
CGCCTGGGAC GCTTCGCCGG CCGCCTGCAG GCGCGGGTGC TGGCCGGCTA CGCGCGCAGC
CTGGACTGGG CGCTGCGCCA TTCGACGCTG ATGCTGGTCG GCCTGCTGGC GACCATGGCC
CTGAACGTCT ACCTCTATGT CGAGGTGCCC AAGACCTTCA TGCCGCAGCA GGATGCCGGC
CAGTTGTCGG GCTTCGTGCG CGGCGACGAC GGACTGTCCT TCCAGGTCAT GCAGCCGAAG
CTGGAGGAGT TCCGCAAGGC GCTGCTGGCC GATCCGGCGG TGCAGAGCGT GGCCGGTTTC
AGCGGCGGCT CGGGCGGGGT CAGCAATGCC ATGCTGATGA TCCGCCTGAA GCCGATCGCC
GAGCGCGGTC TGTCCGCCCA GCAGGTGATC GACCGCCTGC GCAAGAACAT GCCCAAGGTG
CCGGGCGGGC AGATGTACCT GATGGCCGAC CAGGACCTGC AGTTCGGCGG ACGCCAGGGG
CGCACTTCGG AAAACGAATT CGTGCTGCTG TCCAGCGATC TCGACCTGCT CAACGTCTGG
CTGCCCAAGG TGCGCGAGGC TCTGGCCGCC CTGCCGCAGC TCACCGACAT CGAGGCCAAG
CAGGGCGACG GTGCCCAGCA GATCCGCCTG GTGGTGGATC GCGAGAGCGC CAAGCGCCTG
GGCGTGGACA TGGACATGAT CACTGCGGTG CTGAACAACG CCTTCAGCCA GCGGCAGATC
TCCACCATCT ATAACGATCT GAACCAGTAC AAGGTGGTGA TGGAGATCGA TCCGAAGTAC
GCCCAGTCTC CTCAGGCGCT GGACATGGTC CAGGTGATCA CCGACGACGG GCTGCGCGTG
CCGCTGTCGG CCTTCGCCCG CTGGGAGCTC GGCCTGGAGG AAGACCGGGT GCAGCATCAG
GGCCAGTTCG CCGCGGAGAA CATCAGTTAT TCGGTCGCGC CCGGCTACAG CGCGCTGGAG
GCCAACCAGG CGATCGAGCA GGCGGTGGCG CGGGTCGGTC TGCCCACCGA GGTGCAGGGG
ATACTCGGCG GCACCAGCGG CGCCCTGCAG CAGGCGCAGA AGGCGCAGCC GCTGATGATC
CTCGGTGCCC TGATGGTGGT GTACATAGTG CTCGGCATCC TTTACGAGAG CTACGTCCAC
CCGCTGACCA TCCTCTCCAC GCTGCCTTCG GCGGGCGTCG GCGCGTTGCT GGCGATCGAG
CTGGTCGGCG ACGAATTCAG CCTGATCTCG CTGCTCGGCC TGTTCCTGCT GATCGGCGTG
GTGAAGAAAA ACGCCATCCT GATGATCGAC CTGGCGCTGC ACCTGGAACG CCAGGAGCGG
CTGAGTCCCG AGGAGTCGAT CCGGCGCGCC TGCCTGCTGC GCTTCCGGCC GATCCTGATG
ACCACTTTGT CGGCCATCCT CGGTGCCGTG CCGTTGCTGC TGGATACCGC CGAAGGCGCG
GAGATGCGCC GGCCGCTGGG GATCGCCATC GTCGGCGGTC TGGTGCTCAG CCAGTTGCTC
ACCCTCTACA GCACGCCGGC GGTCTACCTG TTCTTCGACC GTCTGCGTCA CCGCTTCAAC
CGCTGGCGCG GCGTGCGCAG CGATGCCGCT CTGGATACCT CGTTATGA
|
|---|
| Protein sequence | MNLSAPFILR PVATLLLSVA ILLVGALSFG LLPVSPLPKM DFPAITVEAS LAGASPQIMA
SSVATPLERA LGGIAGISEM TSRSSQGSTR INILFDIGRD IDAAAREVQA AINAARTLLP
SGMRSMPTYR KINPSQAPIM VLSLTSPVLD KGQLYDVASS IVAQKLSQVS GVGQVQVGGS
SLPAVRIELE PRLLDQYNIA LDEVRQAIAA ANVRRPKGAV EDGERHWQVQ ASDQLERAAD
YRPLVIRYQN DGPVRLSDVA RVHDGLEDRY NSGFYNDEDA VLVIVYRQAD ANILETITEI
RDRLPMLRAV IPASVELEVA MDRSPVIRAT LHEAERTLLI AVALVILVVL AFLGHWRAAL
IPALAVPVSL VGSFAVMYLW GFSLNNLSLM ALIIATGLVV DDAIVVLENI ARHIEEGEKP
LAAALKGSRE VGFTLLSMNL SLVVVFLSIL FMGGIIERLF REFSITLAVA ILISLLVSLT
LTPMLCARWL KSGQEARAPG RLGRFAGRLQ ARVLAGYARS LDWALRHSTL MLVGLLATMA
LNVYLYVEVP KTFMPQQDAG QLSGFVRGDD GLSFQVMQPK LEEFRKALLA DPAVQSVAGF
SGGSGGVSNA MLMIRLKPIA ERGLSAQQVI DRLRKNMPKV PGGQMYLMAD QDLQFGGRQG
RTSENEFVLL SSDLDLLNVW LPKVREALAA LPQLTDIEAK QGDGAQQIRL VVDRESAKRL
GVDMDMITAV LNNAFSQRQI STIYNDLNQY KVVMEIDPKY AQSPQALDMV QVITDDGLRV
PLSAFARWEL GLEEDRVQHQ GQFAAENISY SVAPGYSALE ANQAIEQAVA RVGLPTEVQG
ILGGTSGALQ QAQKAQPLMI LGALMVVYIV LGILYESYVH PLTILSTLPS AGVGALLAIE
LVGDEFSLIS LLGLFLLIGV VKKNAILMID LALHLERQER LSPEESIRRA CLLRFRPILM
TTLSAILGAV PLLLDTAEGA EMRRPLGIAI VGGLVLSQLL TLYSTPAVYL FFDRLRHRFN
RWRGVRSDAA LDTSL
|
|---|
| |