Gene Avin_28620 details

Gene Information

• Locus tag: Avin_28620
• Symbol: gspG1
• ID: 7761767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2949555
• End bp: 2949983
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643805741
• Product: General secretion pathway protein G
• Protein accession: YP_002800009
• Protein GI: 226944936
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATACCC TCGCCCAGGC TCGCCGCAGT CCGGGCTTCA CTCTGCTGGA ACTGCTGGTC 
GTGCTGGTCG TGCTCGGCCT GCTGGCCGGC ATCGTCGGCC CCAAATACTT CAACCAGCTC 
GGTCGCTCGG AAACCAAGGT CGCCCGCGCG CAGATCGAGG GTCTGAGCAA GGCGCTGGAC 
ATCTACCGTG TGGAAACCGG CCACTACCCC AGCACCGAGC AGGGCCTCAA TGCCCTGGCT 
GCGGCGCCCA GCGACGAACC GCGCTGGTCC GGCCCCTATC TGCAAAAAGG CGTGCCGCTG 
GACCCCTGGG GCCGCGCCTA CGTCTACCGC TCGCCGGGTG AAAACGGTGA CTACGACCTG 
CTGACCTTCG GCAAGGACGG TCAGCCCGGC GGCGAAGGCG AGAACGCGGA AATCACCAGT 
TGGCAGTGA 

 

Protein sequence

MHTLAQARRS PGFTLLELLV VLVVLGLLAG IVGPKYFNQL GRSETKVARA QIEGLSKALD 
IYRVETGHYP STEQGLNALA AAPSDEPRWS GPYLQKGVPL DPWGRAYVYR SPGENGDYDL 
LTFGKDGQPG GEGENAEITS WQ