Gene Avin_28600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28600 
Symbol 
ID7761765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2948226 
End bp2948582 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID643805739 
Product6-pyruvoyltetrahydropterin synthase 
Protein accessionYP_002800007 
Protein GI226944934 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTAT TCAAAGAATT CGTATTCGAA GCGGCTCACC GCCTCCCCCG GGTTCCGGCC 
GGACACAAAT GTGGCCGGCT GCACGGCCAC TCCTTCCGCG TGGCCATCTA TATCGAGGGC
GAGGTCGATC CCCACACCGG CTGGATTCGC GACTTTTCCG AGATCAAGGA GATCTTCAAG
CCGATCTACG AACGGCTGGA CCATCACTAC CTGAACGAGA TCGAAGGTCT GGAGAACCCG
ACCAGCGAGA TTCTCGCCAA ATGGATCTGG CGACAGCTCA AACCTCTGCT GCCCGAGCTT
TCCCGGGTGC GCATCCACGA AACCTGCACC AGCGGCTGCG AGTACCGCGG CGACTGA
 
Protein sequence
MELFKEFVFE AAHRLPRVPA GHKCGRLHGH SFRVAIYIEG EVDPHTGWIR DFSEIKEIFK 
PIYERLDHHY LNEIEGLENP TSEILAKWIW RQLKPLLPEL SRVRIHETCT SGCEYRGD