Gene Avin_28570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28570 
Symbol 
ID7761762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2945647 
End bp2946969 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content69% 
IMG OID643805736 
Productsensory histidine protein kinase 
Protein accessionYP_002800004 
Protein GI226944931 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.380534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGATCGA TCCAGCGCCG GCTGGGGCTG GGGCTGATCG GTGTCCTGCT GGGCGCCGGG 
CTTCTGCTGG CGCAAAGCAC GCTCTGGATG CTCGATGCGG GGCTGCGCCG CTACCTGCAG
GACGATCTGC GCGAGCAGGC GGAAGCCCTG CTGACCGGTC TGGTCCGTGG ACAGCAGGGC
ATCCAGCTGG ATGAGCCGCG CCTGCCGGGC GTCTACCAGC GTCCCTATTC CGGCCATTAT
TTCCGTATCG ACCTGGCTGA CGAGAGCTGG CGTTCGCGCT CCCTCTGGGA CCATGCCCTG
GCGGTTTCGC CCGGCACGGG CCTGCAGGAC GGGCTGGTCG ACGGTCCGAA CGGGCAGCGT
CTGCTTCTCT ACCGTGCCGA CTACCGGCGT TTCGGCCAGG ACATTTCGAT CAGCGTGGCT
TCCGACTATA CGCCGATCCT GCAGGCCTAC CGGCGCGTGC AGGGGCTCGG TTGCCTGCTG
GGGCTGGGCG TGCTGGTTCT GGTGGTGCTG CTGCAGCGAC TCACGGTGCG CCGGGCCCTG
AAACCGCTCG AAGAGGTACG CCGCCAGGTC GAGCAGTTGC AGCAGGGGCT TCGCCAGCAA
CTGGACAGCG GGGTTCCCGT CGAGCTGGAG CCATTGGTGG CACAGATCAA CCACCTGCTG
CGCCAGACCG AGAACACGCT GCAGCGGTCG CGGCATGCGG TCGGCAATCT CGGCCACGCC
CTGAAGACGC CGCTGGCCGT GCTGACCAGT CTGGCCGCAC GGGACGAACT GGCTGCCTGC
CCGGAACTGC AGGCGTCGCT GCAGGAGCAA CTGGCGCAGA TCGAGCAGCG CCTGGCCCGG
GAACTGGGGC GTGCGCGGCT GGCCGGCGAG GCGTTGCCGG CCAGCCACTT CGATTGCGCG
GCGGAACTGC CCGGACTGTT CGCCACCCTG GCGATGGTCC ACAACCGGGG GCTGGCGCTC
GATTGGCAGG CGCCGCCAGG CGTGCGCCTG CCGTGGGACC GGGAAGATAT GCTGGAGCTG
CTCGGCAACC TGCTGGACAA CGCCTGCAAG TGGGCGCGGA CGCAGGTGAA ACTGGAAATC
GCCGGTGTGC CGGGCGGCTG GTCGATCCTG GTCGACGACG ACGGTCCGGG AATGGCCGCC
GAATTCCGTG CCGAGGCCAT GAACCGCGGC ATCCGTCTGG ACGAGCAGGT CGCCGGGCAC
GGACTGGGCC TGGCCATAGT GCGCGATATC CTCGAGGCCT GGCAGGGCAG GCTGGCGCTG
CAGGACTCGC CGCTGGGGGG ATTGCGGGTG ACGATCGAGT TGCCGGCGCG CAGGGAAGCG
TGA
 
Protein sequence
MRSIQRRLGL GLIGVLLGAG LLLAQSTLWM LDAGLRRYLQ DDLREQAEAL LTGLVRGQQG 
IQLDEPRLPG VYQRPYSGHY FRIDLADESW RSRSLWDHAL AVSPGTGLQD GLVDGPNGQR
LLLYRADYRR FGQDISISVA SDYTPILQAY RRVQGLGCLL GLGVLVLVVL LQRLTVRRAL
KPLEEVRRQV EQLQQGLRQQ LDSGVPVELE PLVAQINHLL RQTENTLQRS RHAVGNLGHA
LKTPLAVLTS LAARDELAAC PELQASLQEQ LAQIEQRLAR ELGRARLAGE ALPASHFDCA
AELPGLFATL AMVHNRGLAL DWQAPPGVRL PWDREDMLEL LGNLLDNACK WARTQVKLEI
AGVPGGWSIL VDDDGPGMAA EFRAEAMNRG IRLDEQVAGH GLGLAIVRDI LEAWQGRLAL
QDSPLGGLRV TIELPARREA