Gene Avin_28560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28560 
SymbolnuoN 
ID7761761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2944095 
End bp2945567 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content67% 
IMG OID643805735 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_002800003 
Protein GI226944930 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.221247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCA CGACGCAACA ACTCATCGCC CTGCTGCCGC TGCTCATCAC CTCCGCCACC 
ATCGTGGCGG TGATGCTCGG CATCGCCTGG AAGCGCAACC ACTCGCTGAC CTTCATCCTT
TCGGTGTCCG GTCTCAACCT CGCCCTGCTG TCGGTCATTC CGGCGGCCAA GGTCGCGCCG
CTGGCGGTCA CCCCGCTGCT GCAGATGGAC AGCTTCGCCG CGTTCTACAC GGCGCTGATC
CTGGTCGCCA CCCTGGCCTG CGTGACCCTG ATCCATGCCT ACATGGGCGA CAAGAGCGGC
ACGCCGGGCT ATCCCGGCAA CCGCGAGGAA ATGTACCTGC TGATCCTGCT CGCCACGGCC
GGGGCGCTGG TGCTGGTCGG GGCCCAGCAC CTGGCCGGGC TGTTCATCGG CCTGGAACTG
CTTTCGGTAC CGGTCTACGG CATGGTCGCC TATGCCTTCT TCAACCGGCG TTCGCTGGAA
GCCGGCATCA AGTACATGGT GCTCTCGGCC GCGGGCTCGG CCTTCCTGCT GTTCGGCATG
GCCCTGCTCT ACGCCGAATC CGGCAGCCTG AGCTTCGCCA GCCTGGGCAA CGCCCTGGCG
CCGGACGGCG TGCAGGGCAG CCTGATACAT GTCGGCATCG GCCTGATGCT GATCGGCCTG
GCCTTCAAGC TGTCGCTGGT GCCCTTCCAC CTGTGGACGC CGGACGTCTA CGAAGGCGCG
CCGGCACCGG TCTCGGCCTT CCTGGCGACC GCCAGCAAGG TCGCGGTGTT CGCCGTGCTG
CTGCGCCTGT ACCAGATCTC TCCGGCGACG TCCGGCGGCT GGCTGAACGA CCTGCTGAGC
CTGATCGCCG TCGCCTCGAT CCTGCTCGGC AACCTGCTGG CGCTGCTGCA GAGCAACCTC
AAGCGTCTGC TCGGCTACTC GTCCATCGCC CATTTCGGCT ACCTGCTGGT GGCGCTGATC
GCCAGCGAGG GCATGGCCGT GGAGGCGATC GGCGTCTACC TGGCGTCCTA CGTGCTGACC
AGCCTCGGCG CCTTCGGGGT GATCACCCTG ATGTCCACGC CCTACAGCGG CCGCGACGCC
GACGCCCTGT ACGAGTACCG CGGCCTGTTC TGGCGCCGTC CGTACCTGAC CGCCGTGCTC
ACCACCATGA TGCTGTCGCT GGCCGGCATC CCGCTGACGG CCGGCTTCAT CGGCAAGTTC
TACGTGATCG CCGCGGGCGT CGAGTCCGGG CTCTGGTGGC TGCTCGCGGC GCTGGTCATC
GGTAGCGCCA TCGGCGTCTA CTACTACCTG CGGGTGACGG TCACCCTGTA CCTGGTCGAG
CCGAAGTTGC AGCGTCGCGA CGCTCCGCTC CGCTGGAACC TGGGCAGCGG CGGCATCATG
CTGCTGCTCA TCGCCCTGCT GGCCTTCGGC CTCGGCGTCT ACCCGCAACC CCTGCTGGAG
CTGGTGCAGC AGAGCGGCCT GCTGGTCGGC TGA
 
Protein sequence
MQITTQQLIA LLPLLITSAT IVAVMLGIAW KRNHSLTFIL SVSGLNLALL SVIPAAKVAP 
LAVTPLLQMD SFAAFYTALI LVATLACVTL IHAYMGDKSG TPGYPGNREE MYLLILLATA
GALVLVGAQH LAGLFIGLEL LSVPVYGMVA YAFFNRRSLE AGIKYMVLSA AGSAFLLFGM
ALLYAESGSL SFASLGNALA PDGVQGSLIH VGIGLMLIGL AFKLSLVPFH LWTPDVYEGA
PAPVSAFLAT ASKVAVFAVL LRLYQISPAT SGGWLNDLLS LIAVASILLG NLLALLQSNL
KRLLGYSSIA HFGYLLVALI ASEGMAVEAI GVYLASYVLT SLGAFGVITL MSTPYSGRDA
DALYEYRGLF WRRPYLTAVL TTMMLSLAGI PLTAGFIGKF YVIAAGVESG LWWLLAALVI
GSAIGVYYYL RVTVTLYLVE PKLQRRDAPL RWNLGSGGIM LLLIALLAFG LGVYPQPLLE
LVQQSGLLVG