| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_28480 |
|---|
| Symbol | nuoF |
|---|
| ID | 7761753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2934096 |
|---|
| End bp | 2935445 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643805727 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_002799995 |
|---|
| Protein GI | 226944922 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTA CCTCCATCGG TCCCGCCAAC CGCACTCCCC GCACGGCGGA AACCCATCCC
CTGACCTGGC GCCTGCGCGA AGACGCCGAA CCGGTCTGGC TCGACGAATA CCAGCAGAAG
AACGGCTATG CCGCGGCGCG CAAGGCGCTC GCCGAACTGT CGCCCGCCGA CATCGTCGCC
ATCGTCAAGG ACTCCGGCCT CAAGGGACGT GGCGGCGCCG GCTTCGCCAC CGGCATCAAA
TGGGGCCTGA TGCCCGCCGA TGACTCCATC GACATCCGCT ACCTGCTGTG CAACGCGGAC
GAAATGGAGC CGAACACCTG GAAAGACCGA CTGCTCATGG AGCAGTTGCC GCACCAGTTG
ATCGAGGGCA TGCTGATCAG CGCCCGGGCG CTGAAGGCCT ATCGCGGTTA CATCTTCCTG
CGCGGCGAAT ACATCGATGC CGCCCGCAAC CTCAACCGCG CCATTGCCGA AGCCAAGGCC
GCCGGCCTGC TCGGCAAGAA CATCCTCGGC AGCGGCTTCG ACTTCGAGCT GTTCGTGCAC
ACCGGCGCCG GCCGCTACAT CTGCGGCGAA GAAACCGCGC TGATCAACTC CCTCGAAGGG
CGCCGCGCCA ACCCGCGCTC CAAGCCGCCC TTCCCGGCCG CCGTCGGCGT CTGGGGCAAG
CCGACCTGCG TGAACAACGT CGAAACCCTG AGCAACGTGC CGGCGATCGT CGGCAACGGC
GTCGACTGGT ACAAATCCCT GGCCCGGCCC GGCAGCGAGG ACATGGGCAC CAAGCTGATG
GGCTTCTCCG GCAAGGTGAA GAACCCCGGC CTCTGGGAAC TGCCCTTCGG CATCACCGCT
CGCGAGCTGT TCGAGGACTA TGCCGGCGGC ATGCGCGACG GTTACCGGCT CAAGTGCTGG
CAATCGGGCG GAGCCGGCAC CGGCTTCCTG CTCCCCGAGC ACCTGGACGC ACAGATGTAT
GCCGGCGGCA TAGGCAAGGT CGGCACCCGC ATGGGCACCG GCCTGGCTCT GGCGGTGGAC
GACAGTATCA ACATGGTCTC GCTGCTGCGC AATCTGGAGG AGTTCTTCGC CCGCGAATCC
TGCGGCTGGT GCACCCCGTG CCGCGACGGC CTGCCGTGGA GCGTCAAGCT GTTGAGCGCC
CTGGAGCGCG GCGAAGGCCA GCCCGGCGAC CTGGAGACCC TGGAGCAACT GGTCAGATTC
CTCGGCCCGG GCAAGACCTT CTGCGCCCAC GCACCGGGCG CCGTCGAGCC GCTGGGCAGC
GCCCTCAAGT ACTTCCGTCA GGAGTTCGAG GCCGGCGTTC GGGGAAGCCC CGTGGAAACA
CGCCAGAGCA TCGCCGCTCC ACAGATTTGA
|
|---|
| Protein sequence | MTLTSIGPAN RTPRTAETHP LTWRLREDAE PVWLDEYQQK NGYAAARKAL AELSPADIVA
IVKDSGLKGR GGAGFATGIK WGLMPADDSI DIRYLLCNAD EMEPNTWKDR LLMEQLPHQL
IEGMLISARA LKAYRGYIFL RGEYIDAARN LNRAIAEAKA AGLLGKNILG SGFDFELFVH
TGAGRYICGE ETALINSLEG RRANPRSKPP FPAAVGVWGK PTCVNNVETL SNVPAIVGNG
VDWYKSLARP GSEDMGTKLM GFSGKVKNPG LWELPFGITA RELFEDYAGG MRDGYRLKCW
QSGGAGTGFL LPEHLDAQMY AGGIGKVGTR MGTGLALAVD DSINMVSLLR NLEEFFARES
CGWCTPCRDG LPWSVKLLSA LERGEGQPGD LETLEQLVRF LGPGKTFCAH APGAVEPLGS
ALKYFRQEFE AGVRGSPVET RQSIAAPQI
|
|---|
| |