Gene Avin_28460 details

Gene Information

• Locus tag: Avin_28460
• Symbol: nuocd
• ID: 7761751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2931822
• End bp: 2933603
• Gene Length: 1782 bp
• Protein Length: 593 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643805725
• Product: bifunctional NADH:ubiquinone oxidoreductase subunit C/D
• Protein accession: YP_002799993
• Protein GI: 226944920
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C; [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCAG ACAGCGTTCT GTCCATTCCG CCGTACAAGG CCGACGACCA AGACGTGGTC 
GCCGAACTCA ACTCCCGTTT TGGTGCCGAA ACCTTCACCG TACAAAGCAC CTGCACGGAC 
ATGCCCGTGC TCTGGGTAGC ACGGGAAAAA CTCATCGAAG TCCTGCGCTT CCTGCGCAAC 
CTGCCGCGCC CCTACGTCAT GCTGTATGAC CTGCATGGCG TCGACGAGCG GCTGCGTACC 
CAACGCCGCG GCCTGCCGGA GGCCGACTTC AGCGTCTTCT ATCATTTGCT GTCGATCGAA 
CGGAACAGCG ACGTGATGAT CAAGGTCGCC CTGAAGGAGG GCGACCTCAA GCTACCCAGC 
GCCACCGGCA TCTGGCCGAA CGCCAACTGG TACGAGCGCG AAATCTGGGA CATGTACGGG 
ATCCACATCG AAGGCCACCC GCACCTGACC CGCATCCTGA TGCCGCCGAC CTGGGAAGGC 
CATCCGCTGC GCAAGGATTA TCCGGCCCGC GCCACCGAAT TCGACCCTTA CAGCCTGTCG 
GCGGCCAAGC AGGATCTGGA GCAGGAAGCC CTGCGCTTCA AGCCCGAGGA GTGGGGCATG 
AAGCGCGGCG GCGAGCACGA GGACTTCATG TTCCTCAACC TCGGCCCCAA CCACCCGTCC 
GCCCACGGCG CCTTCCGTAT CATTCTGCAA CTGGACGGCG AGGAAATCGT CGACTGCGTG 
CCGGAGATCG GCTATCACCA CCGCGGCGCC GAGAAGATGG CCGAGCGGCA GAGCTGGCAC 
AGCTTCATTC CCTACACCGA TCGCATCGAC TACCTCGGCG GGGTGATGAA CAATCTGCCC 
TACGTGCTGG CCGTCGAGAA GCTGGCCGGC ATCAAGGTGC CGCAGCGGGT CGACGTGATC 
CGCGTCATGA TGGCGGAGTT CTTCCGCATC CTGAACCACC TCCTCTACCT CGGTACCTAT 
ATCCAGGACG TCGGCGCCAT GACGCCGGTG TTCTTCACCT TCACCGACCG CCAGCGCGCC 
TACAAGGTGG TCGAGGCCAT CACCGGCTTC CGCCTGCATC CGGCCTGGTA CCGCATCGGC 
GGGGTCGCCC ACGACCTGCC GCGCGGCTGG GACGCCCTGG TCAAGGAGTT CGTCGAGTGG 
ATGCCCAAGC GTCTCGACGA GTACGAGAAG GCGGCACTGC AGAACAGCAT CCTGCGCGGC 
CGCACCATGG ACGTGGCCAG GTACGACACC CGGCAGGCAC TGGAATGGGG CGTCACCGGC 
GCCGGCCTGC GGGCCACCGG TCTCGACTTC GACCTGCGCA AGGCGCGCCC CTATTCCGGC 
TACGAGAACT TCGAATTCGA AGTCCCGCTG GCGCACAACG GCGACGCCTA CGACCGCTGC 
ATGGTCAAGC TGGGCGAGAT GCGCCAGAGC CTGCGGATCA TCGAGCAGTG CCGGAGGAAC 
ATGCCGGAAG GCCCCTACAA GGCCGACCAT CCGTTGACCA CGCCGCCACC GAAGGAGCGC 
ACGCTGCAGC ACATCGAGAC CCTGATCACC CACTTCCTGC AGGTGTCCTG GGGTCCGGTG 
ATGCCGGCCA ACGAATCCTT CCAGATGATC GAGGCGACCA AGGGCATCAA CAGCTACTAC 
CTGACCAGCG ATGGCAGCAC CATGAGCTAC CGCACGCGCA TCCGTACCCC GAGCTACGCC 
CACCTGCAGC AGATCCCTTC GGTGATCCGC GGCAGCATGG TGGCCGACCT GATCGCCTAC 
CTGGGCAGCA TCGACTTCGT TATGGCCGAC GTGGACCGCT GA 

 

Protein sequence

MTADSVLSIP PYKADDQDVV AELNSRFGAE TFTVQSTCTD MPVLWVAREK LIEVLRFLRN 
LPRPYVMLYD LHGVDERLRT QRRGLPEADF SVFYHLLSIE RNSDVMIKVA LKEGDLKLPS 
ATGIWPNANW YEREIWDMYG IHIEGHPHLT RILMPPTWEG HPLRKDYPAR ATEFDPYSLS 
AAKQDLEQEA LRFKPEEWGM KRGGEHEDFM FLNLGPNHPS AHGAFRIILQ LDGEEIVDCV 
PEIGYHHRGA EKMAERQSWH SFIPYTDRID YLGGVMNNLP YVLAVEKLAG IKVPQRVDVI 
RVMMAEFFRI LNHLLYLGTY IQDVGAMTPV FFTFTDRQRA YKVVEAITGF RLHPAWYRIG 
GVAHDLPRGW DALVKEFVEW MPKRLDEYEK AALQNSILRG RTMDVARYDT RQALEWGVTG 
AGLRATGLDF DLRKARPYSG YENFEFEVPL AHNGDAYDRC MVKLGEMRQS LRIIEQCRRN 
MPEGPYKADH PLTTPPPKER TLQHIETLIT HFLQVSWGPV MPANESFQMI EATKGINSYY 
LTSDGSTMSY RTRIRTPSYA HLQQIPSVIR GSMVADLIAY LGSIDFVMAD VDR