Gene Avin_28390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_28390 
Symbol 
ID7761744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2923673 
End bp2924839 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID643805718 
Productclavaminate synthase-like superfamily protein 
Protein accessionYP_002799986 
Protein GI226944913 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCG ACATTCCACT TCAATTCCTG GGGGGCATCA GCGCACGCGA GTTCCTGCGC 
GACTACTGGC AGAAGAGGCC CCTGCTGATC CGCCAGGCCG TCCCCGGCTT CGAAAGCCCC
ATCTCGCCGG ACGAACTGGC CGGCCTGTCG CTCGAGGAAG AAGTCGAGTC GCGCCTGATC
ATCGAGCACG GCAACCACCC CTGGGAACTG CGCCGTGGCC CGTTCGACGA GGAAACCTAC
CGGAACCTGC CCGAGCGCGA CTGGACCCTG CTGGTCCAGG CAGTCGACCA GTTCGTTCCC
GAGGTCGCCG AACTGCTGGA AAACTTCCGC TTTCTGCCCA GTTGGCGCAT CGACGATGTG
ATGATCAGCT ATGCCGCGCC AGGGGGTGGC GTAGGGCCAC ACTACGACAA CTATGACGTG
TTCCTGCTGC AGGGATACGG CAAGCGGCGC TGGCGGATCG GCCAGATGTG CGACAGCGAT
AGCCCGCTGC TGAAACATGC CGACCTGCGC ATCCTCGCCG AATTCCAGAA CGGCGAGGAT
TGGGTGCTGG AGCCAGGCGA CATGCTTTAT CTGCCACCCC GTCTGGCCCA CTTCGGTACC
GCGGTCGACG AGTGCATGAC CTATTCGGTG GGCTTCCGTG CCCCCAGCGC CGCTGAAGTG
CTCACCCATT TCACCGATTT CCTCGCCCAG TTTCTGCCCG ACGAGGAGCG CTACGGCGAT
CCGGGCATAG GTCCCTGCGA GGACCCGCAC CAGATCCAGC GCGATGCACT GGAACGCCTC
AAAGGCCTGA TTCAGGAGCA CATGGGCGAC GAGCGCCTGC TGCTCACCTG GTTCGGCCAG
TTCATGACCG AACCGCGCTA TCCCGAACTG GTCGCCGGCG CGGAAATGCA GGAGCAGGAT
TTCCTGACCA ACCTGCAGGA GGGTGGCGTA CTGATCCGCA ATCCCAGCGC CCGCCTGGCC
TGGTCCGAGG TCGGCCAGGA CCTGCTGCTG TTCGCCAGCG GCCAGAGCCG CCAGCTCCCC
GGTCGCCTGC GCGAGCTGCT CAAGCTGATC TGCAGCGCCG ATGCCCTGCA TGCGGACAAC
CTGGCCTCCT GGGTGGCGGA CGAGGACGGC CGTCAGCTCC TCTGGCAGTT GCTCGTGCAA
GGCAGCCTGG AATTCGCCGA TGACTGA
 
Protein sequence
MTSDIPLQFL GGISAREFLR DYWQKRPLLI RQAVPGFESP ISPDELAGLS LEEEVESRLI 
IEHGNHPWEL RRGPFDEETY RNLPERDWTL LVQAVDQFVP EVAELLENFR FLPSWRIDDV
MISYAAPGGG VGPHYDNYDV FLLQGYGKRR WRIGQMCDSD SPLLKHADLR ILAEFQNGED
WVLEPGDMLY LPPRLAHFGT AVDECMTYSV GFRAPSAAEV LTHFTDFLAQ FLPDEERYGD
PGIGPCEDPH QIQRDALERL KGLIQEHMGD ERLLLTWFGQ FMTEPRYPEL VAGAEMQEQD
FLTNLQEGGV LIRNPSARLA WSEVGQDLLL FASGQSRQLP GRLRELLKLI CSADALHADN
LASWVADEDG RQLLWQLLVQ GSLEFADD