Gene Avin_28010 details

Gene Information

• Locus tag: Avin_28010
• Symbol: glgE
• ID: 7761706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 2886656
• End bp: 2888659
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643805680
• Product: family 13 glycosyl hydrolase
• Protein accession: YP_002799948
• Protein GI: 226944875
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACA CCAGCCAGCC CGGCGTGCAT TGCGAGAACC GTCGTCCGAC CCTGGAGGAA 
GCGCTGCGTC TACCGCGGAT CGCCATCGAG AACACCGAAC CGGTTGTCGA CAACGGACGC 
TTCGCCGTCA AGGCGATCGC CGGCCTGCCG GTGACGGTGG CCAGCACCGT CTTCACCGAC 
GGCCACGACC AACTCGGCGC CGCCCTCTAC TGGCGCGCCG ACGGCGAGAG CGGCTGGCAC 
CGCCTGCGCA TGAAGTTCGT CGGCAACGAC CGCTGGCAGG TCGAGTTCAC GCCGCTGCGC 
GTCGCCCGGC ATCTGTTCGT GGTCGAGGCC TGGTGGGATC TCTACGAAAC CTACCGGCAC 
GAGTTGCAGA AGAAGCATGC CGCCGGGGTG CCGGTCTCCC TGGAGCTGCA GGAGGGCCGC 
CTGCATCTGC AGCGGGCCGC CGAACACGCC CGGGGCGAGG TGCGCGCCAC GCTGGAGGAT 
CTCCTGCGGC GTCTGGAGCA GGCCCCGCAC ACCGAGGCCG TGGAGTTGCT GCTGAGCGGC 
GAGGCCTCCG CCGCCATGAG CGCCGCCGAC CCGTATCCGC ATCGCACCTA CAGCAATGCC 
TTCCCCCTGG ACGTGGAGCG CGAACGGGCC CTGTTCGCTA GTTGGTACGA ACTCTTCCCC 
CGCTCGCAGA CCGACAGCCC GCATCGCCAC GGCACCTTCA AGGATGTCAT CGCCCGCCTG 
CCGGCGATCC ACGACATGGG TTTCGATGTC CTCTACTTCC CGCCGATCCA TCCGATCGGC 
CGGCGCTTTC GCAAGGGCCG CAACAACAGC CTGGAGGCCG GGCCGGACGA TCCCGGCAGC 
CCCTATGCCA TCGGCGGCGA GGAGGGCGGC CACGAGGCCA TCCATCCGCA ACTGGGCTCG 
CGCGAGGATT TCCGCGAACT GGTCGCCGCC GCCGGCGAGT ACGATCTGGA GATCGCCCTG 
GACTTCGCCG TGCAGTGCTC CCAGGACCAC CCCTGGCTGA AGCAGCATCC CGGCTGGTTC 
TCCTGGCGCC CGGACGGCAG CATCCGCTAC GCCGAGAATC CGCCGAAGAA ATACCAGGAC 
ATCGTCAACG TCGACTTCTA TGCCAAGGAC GCCATCCCCG ACCTCTGGAT GGCGCTGCGC 
GACGTGGTGC TCGGCTGGGT CGCCGAGGGG GTGAAGATCT TCCGCGTCGA CAACCCACAC 
ACCAAGCCGT TGCCGTTCTG GGAGTGGCTG ATCGGCGACG TGCGCGGCCG GCACCCGGAA 
GTGATCTTTC TCGCCGAGGC CTTCACCCGC CCGGCGATGA TGCTGCGCCT GGGCAAGCTC 
GGCTTCTCGC AGAGCTACAC CTATTTCACC TGGCGCAATG CCAAGGAAGA ACTGACCGCC 
TACTTCGCCG AGCTGAACGA GGCGCCGGCC AGACACTGCG TGCGACCGAA CTTCTTCGTC 
AACACGCCGG ACATCAACCC CTTCTTCCTG CAGCACTCCG GGCGCGCCGG CTTCCTGATC 
CGCGCCGCGC TGGCGACCAT GGGCTCCGGG CTGTGGGGCA TGTACTCGGG GTTCGAGCTG 
TGCGAGGCGG CGGCGCTGCC CGGCAGGGAG GAATACCTCG ACTCGGAGAA GTACGAGATC 
CGCCCGCGCG ACTACCGGGC GCCCGGCAAC ATCGTCGCCG AGATCGCCCA GCTCAACCGC 
ATCCGCCGCT ACAACCCGGC GCTGCAGACC CATCTCGGCT TCGAGCCGTA CAACATCTGG 
AACGACAACA CCCTGCTGTT CGGCAAGCGT ACGCCGGACC TCTCCAACTT CGTCCTGGTC 
GCCATCAACC TCGATCCCTG GCACGCCCAG GAGGCCCATT TCGAGCTGCC GCTCTGGGAG 
TTCGGCCTGC CCGACCACGC TGACATGCAC GGCGAGGATC TGATGAACGG CCATCGCTGG 
ACCTGGCACG GTAAGAAGCA GTGGACGCGC CTCGACCCCG ACTATCTGCC CTTCGGTATC 
TGGAAGCTGA CCCCACCGGA GTAA 

 

Protein sequence

MSDTSQPGVH CENRRPTLEE ALRLPRIAIE NTEPVVDNGR FAVKAIAGLP VTVASTVFTD 
GHDQLGAALY WRADGESGWH RLRMKFVGND RWQVEFTPLR VARHLFVVEA WWDLYETYRH 
ELQKKHAAGV PVSLELQEGR LHLQRAAEHA RGEVRATLED LLRRLEQAPH TEAVELLLSG 
EASAAMSAAD PYPHRTYSNA FPLDVERERA LFASWYELFP RSQTDSPHRH GTFKDVIARL 
PAIHDMGFDV LYFPPIHPIG RRFRKGRNNS LEAGPDDPGS PYAIGGEEGG HEAIHPQLGS 
REDFRELVAA AGEYDLEIAL DFAVQCSQDH PWLKQHPGWF SWRPDGSIRY AENPPKKYQD 
IVNVDFYAKD AIPDLWMALR DVVLGWVAEG VKIFRVDNPH TKPLPFWEWL IGDVRGRHPE 
VIFLAEAFTR PAMMLRLGKL GFSQSYTYFT WRNAKEELTA YFAELNEAPA RHCVRPNFFV 
NTPDINPFFL QHSGRAGFLI RAALATMGSG LWGMYSGFEL CEAAALPGRE EYLDSEKYEI 
RPRDYRAPGN IVAEIAQLNR IRRYNPALQT HLGFEPYNIW NDNTLLFGKR TPDLSNFVLV 
AINLDPWHAQ EAHFELPLWE FGLPDHADMH GEDLMNGHRW TWHGKKQWTR LDPDYLPFGI 
WKLTPPE